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  5. AGT25384

AGT25384 (N559_3746)


Aliases : N559_3746

Description : putative ABC transport system permease component [Ensembl]. transmembrane domain MetI-like [InterProScan].


Gene families : OG_02_0000034 (OrthoFinder) Phylogenetic Tree(s): OG0000034_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25384
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC73918 gsiC, b0831 glutathione ABC transporter permease [Ensembl].... 0.04 OrthoFinder
AAC74375 sapB, b1293 antimicrobial peptide transport ABC transporter permease... 0.05 OrthoFinder
AAC76568 dppB, b3543 dipeptide/heme ABC transporter permease [Ensembl].... 0.07 OrthoFinder
AAL00509 spr1706, amiC ABC transporter membrane-spanning permease-oligopeptide... 0.04 OrthoFinder
AAL19786 STM0850, yliC putative ABC transporter periplasmic binding protein... 0.03 OrthoFinder
AAL20182 STM1256 putative ABC transporter [Ensembl].... 0.03 OrthoFinder
AAL22490 STM3629, dppB dipeptide transport protein 1 [Ensembl].... 0.17 OrthoFinder
AEA95055 opp2B, OG1RF_12368 oligopeptide ABC superfamily ATP binding cassette... 0.04 OrthoFinder
AGT22122 N559_0303, NikB nickel transporter permease NikB [Ensembl].... 0.04 OrthoFinder
AGT23464 N559_1722, DppB putative dipeptide ABC transporter, permease protein... 0.06 OrthoFinder
AGT24128 N559_2435 peptide ABC transporter membrane protein [Ensembl].... 0.07 OrthoFinder
AKI48108 L2625_00135 oligopeptide ABC transporter, permease protein... 0.03 OrthoFinder
CCL17022 oppB, BN171_1090003 ABC-type transport system, oligopeptide-family permease... 0.03 OrthoFinder
CCL19135 appB, BN171_2880002 ABC-type transport system, oligopeptide-family permease... 0.03 OrthoFinder
CCP44039 oppB, Rv1283c Probable oligopeptide-transport integral membrane... 0.03 OrthoFinder
CCP46488 dppB, Rv3665c Probable dipeptide-transport integral membrane protein... 0.02 OrthoFinder
CPC32208 nikB, ERS093114_00035 nickel transport system permease protein [Ensembl].... 0.04 OrthoFinder
CPC43926 oppB_2, ERS093114_00443 peptide ABC transporter permease [Ensembl].... 0.04 OrthoFinder
CPC95781 gsiC, ERS093114_01725 Oligopeptide transport system permease protein... 0.04 OrthoFinder
CRP12152 dppB Dipeptide transport system permease protein DppB... 0.02 OrthoFinder
EDJ91926 CGSHi22421_09223 oligopeptide permease ABC transporter membrane component... 0.07 OrthoFinder
KNA51872 VCV51_030402 binding-protein-dependent transport system inner... 0.04 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003852 2-isopropylmalate synthase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006536 glutamate metabolic process IEP Enrichment
BP GO:0006537 glutamate biosynthetic process IEP Enrichment
BP GO:0006551 leucine metabolic process IEP Enrichment
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0009098 leucine biosynthetic process IEP Enrichment
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Enrichment
MF GO:0015930 glutamate synthase activity IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1904949 ATPase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 129 350
No external refs found!