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  5. AGT25388

AGT25388 (N559_3752)


Aliases : N559_3752

Description : putative ABC transporter [Ensembl].


Gene families : OG_02_0000004 (OrthoFinder) Phylogenetic Tree(s): OG0000004_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25388
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AAC73753 gltL, b0652 glutamate/aspartate ABC transporter ATPase [Ensembl].... 0.03 OrthoFinder
AAC74984 tcyN, b1917 putative ABC transporter ATPase [Ensembl]. ABC... 0.04 OrthoFinder
AAC75366 hisP, b2306 histidine ABC transporter ATPase [Ensembl]. ABC... 0.04 OrthoFinder
AAK98953 spr0149, ABC-NBD ABC transporter ATP-binding protein-unknown substrate... 0.03 OrthoFinder
AAL00158 spr1354, glnQ ABC transporter ATP-binding protein-glutamine transport... 0.03 OrthoFinder
AAL19465 STM0511, sfbB putative ABC-type transport system ATPase component/cell... 0.03 OrthoFinder
AAL21252 STM2351, hisP histidine and lysine/arginine/ornithine transport... 0.04 OrthoFinder
AGT22989 N559_1225 ATP-binding component of transport system for glycine,... 0.07 OrthoFinder
AGT23905 N559_2193 putative ABC transporter [Ensembl]. 0.05 OrthoFinder
AGT24090 N559_2393 putative ATP-binding component of a transport system [Ensembl]. 0.05 OrthoFinder
AGT24332 N559_2656 D-and L-methionine ABC transporter ATP-binding protein [Ensembl]. 0.07 OrthoFinder
AGT24560 N559_2893 ABC transporter, ATP-binding protein [Ensembl]. NIL... 0.06 OrthoFinder
AGT25285 N559_3643 ATP-binding protein of glutamate/aspartate transport... 0.04 OrthoFinder
AGT25742 N559_4116 glutamate/aspartate transport system ATP-binding... 0.06 OrthoFinder
AGT25826 N559_4201 DL-methionine transporter ATP-binding subunit [Ensembl].... 0.04 OrthoFinder
CCG26203 No alias RTX toxin transporter, ATP-binding protein [Ensembl].... 0.02 OrthoFinder
CCL18560 BN171_2440001 ABC-type transport system,cystine/aminoacid-family... 0.03 OrthoFinder
CPD19941 tcyC, ERS093114_02273 amino acid ABC transporter%2C ATP-binding protein... 0.03 OrthoFinder
CPD33665 metN_2, ERS093114_02598 ABC transporter ATP-binding protein [Ensembl]. NIL... 0.03 OrthoFinder
CRN71228 hisP_1 Histidine transport ATP-binding protein HisP [Ensembl].... 0.02 OrthoFinder
CRO45104 metN_1 Methionine import ATP-binding protein MetN [Ensembl].... 0.07 OrthoFinder
CRO59431 glnQ_2 Glutamine transport ATP-binding protein GlnQ [Ensembl].... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005337 nucleoside transmembrane transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
MF GO:0008671 2-dehydro-3-deoxygalactonokinase activity IEP Enrichment
MF GO:0008774 acetaldehyde dehydrogenase (acetylating) activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Enrichment
MF GO:0015288 porin activity IEP Enrichment
BP GO:0015716 organic phosphonate transport IEP Enrichment
BP GO:0015858 nucleoside transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016833 oxo-acid-lyase activity IEP Enrichment
MF GO:0019200 carbohydrate kinase activity IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
BP GO:0019520 aldonic acid metabolic process IEP Enrichment
BP GO:0019583 galactonate metabolic process IEP Enrichment
BP GO:0019584 galactonate catabolic process IEP Enrichment
MF GO:0022829 wide pore channel activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0030288 outer membrane-bounded periplasmic space IEP Enrichment
BP GO:0034192 D-galactonate metabolic process IEP Enrichment
BP GO:0034194 D-galactonate catabolic process IEP Enrichment
CC GO:0042597 periplasmic space IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044275 cellular carbohydrate catabolic process IEP Enrichment
BP GO:0045229 external encapsulating structure organization IEP Enrichment
BP GO:0046176 aldonic acid catabolic process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071555 cell wall organization IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 22 178
No external refs found!