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  5. AGT25744

AGT25744 (N559_4118)


Aliases : N559_4118

Description : amino acid ABC transporter membrane protein [Ensembl]. transmembrane domain MetI-like [InterProScan].


Gene families : OG_02_0000016 (OrthoFinder) Phylogenetic Tree(s): OG0000016_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25744
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC73754 gltK, b0653 glutamate/aspartate ABC transporter permease [Ensembl].... 0.03 OrthoFinder
AAC73897 glnP, b0810 glutamine transporter subunit [Ensembl].... 0.03 OrthoFinder
AAC73949 artQ, b0862 arginine ABC transporter permease [Ensembl].... 0.04 OrthoFinder
AAC74985 tcyL, b1918 ABC family putative inner membrane permease [Ensembl].... 0.16 OrthoFinder
AAK99337 spr0533, glnP ABC transporter membrane-spanning permease-glutamine... 0.03 OrthoFinder
AAK99428 spr0624, glnP ABC transporter membrane-spanning permease-glutamine... 0.05 OrthoFinder
AAL00119 spr1315, ABC-MSP ABC transporter membrane-spanning... 0.04 OrthoFinder
AAL19614 STM0663, gltK glutamate/aspartate transporter [Ensembl].... 0.06 OrthoFinder
AAL19765 STM0829, glnP glutamine high-affinity transporter [Ensembl].... 0.07 OrthoFinder
AAL19824 STM0889, artQ arginine 3rd transport system [Ensembl].... 0.09 OrthoFinder
AAL20864 STM1952, yecS putative ABC-type amino acid transporter [Ensembl].... 0.04 OrthoFinder
AEA93582 OG1RF_10895 glutamine ABC superfamily ATP binding cassette... 0.03 OrthoFinder
AEA93583 OG1RF_10896 amino acid ABC superfamily ATP binding cassette... 0.03 OrthoFinder
AGT24219 N559_2537 glutamine ABC transporter permease component [Ensembl].... 0.04 OrthoFinder
AHY40133 CJ8421_04550 ABC-type amino-acid transporter permease [Ensembl].... 0.03 OrthoFinder
AKI50281 L2625_02449 polar amino acid ABC transporter, permease protein... 0.05 OrthoFinder
AKI50282 L2625_02450 polar amino acid ABC transporter, permease protein... 0.05 OrthoFinder
AKP14954 yecS, WX61_00888 Inner membrane amino-acid ABC transporter permease... 0.02 OrthoFinder
AKP15748 tcyB, WX61_01713 L-cystine transport system permease protein TcyB... 0.03 OrthoFinder
CBI66166 yckJ, HPB8_609 putative polar amino acid transport system permease... 0.02 OrthoFinder
CCG26871 No alias ABC transporter membrane-spanning permease-glutamine... 0.04 OrthoFinder
CCL16928 BN171_1000002 ABC-type transport system, aminoacid-family permease... 0.03 OrthoFinder
CCL18017 BN171_2030003 ABC-type transport system, aminoacid-family permease... 0.03 OrthoFinder
CCL18563 BN171_2440004 ABC-type transport system,cystine/aminoacid-family... 0.05 OrthoFinder
CCL18564 BN171_2440005 ABC-type transport system,cystine/aminoacid-family... 0.04 OrthoFinder
CPD19910 tcyB, ERS093114_02272 cystine transport system permease protein [Ensembl].... 0.04 OrthoFinder
CPD30896 artQ, ERS093114_02521 extracellular glutamine-binding protein [Ensembl].... 0.03 OrthoFinder
CRO48501 hisM Histidine transport system permease protein HisM... 0.03 OrthoFinder
CRO59374 glnM_3 putative glutamine ABC transporter permease protein GlnM... 0.03 OrthoFinder
CRP60552 yecS_3 Inner membrane amino-acid ABC transporter permease... 0.04 OrthoFinder
CRP60578 yecS_4 Inner membrane amino-acid ABC transporter permease... 0.05 OrthoFinder
KNA58918 VCV51_031257 His/Glu/Gln/Arg/opine family amino ABC transporter... 0.03 OrthoFinder
KNA59811 VCV51_030871 binding-protein-dependent transport system inner... 0.06 OrthoFinder
KNA59872 VCV51_032283 binding-protein-dependent transport system inner... 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003852 2-isopropylmalate synthase activity IEP Enrichment
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Enrichment
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006536 glutamate metabolic process IEP Enrichment
BP GO:0006537 glutamate biosynthetic process IEP Enrichment
BP GO:0006551 leucine metabolic process IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008172 S-methyltransferase activity IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
BP GO:0009086 methionine biosynthetic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
BP GO:0009098 leucine biosynthetic process IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
MF GO:0015930 glutamate synthase activity IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016597 amino acid binding IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 43 226
No external refs found!