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  5. AGT25799

AGT25799 (N559_4174)


Aliases : N559_4174

Description : DNA polymerase IV [Ensembl]. impB/mucB/samB family C-terminal domain, little finger domain, UmuC domain, IMS family HHH motif, Y-family [InterProScan].


Gene families : OG_02_0000571 (OrthoFinder) Phylogenetic Tree(s): OG0000571_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT25799
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AAC73335 dinB, b0231 DNA polymerase IV [Ensembl]. IMS family HHH motif,... 0.1 OrthoFinder
AAL19270 STM0313, dinP DNA polymerase IV [Ensembl]. IMS family HHH motif,... 0.08 OrthoFinder
CCP46215 Rv3394c Conserved hypothetical protein [Ensembl]. impB/mucB/samB... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEA Interproscan
BP GO:0006281 DNA repair IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003911 DNA ligase (NAD+) activity IEP Enrichment
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006282 regulation of DNA repair IEP Enrichment
BP GO:0007154 cell communication IEP Enrichment
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Enrichment
MF GO:0008770 [acyl-carrier-protein] phosphodiesterase activity IEP Enrichment
MF GO:0009378 four-way junction helicase activity IEP Enrichment
BP GO:0009432 SOS response IEP Enrichment
BP GO:0009605 response to external stimulus IEP Enrichment
BP GO:0009991 response to extracellular stimulus IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0017013 protein flavinylation IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
BP GO:0031668 cellular response to extracellular stimulus IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0051052 regulation of DNA metabolic process IEP Enrichment
BP GO:0051302 regulation of cell division IEP Enrichment
BP GO:0051782 negative regulation of cell division IEP Enrichment
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Enrichment
BP GO:0071496 cellular response to external stimulus IEP Enrichment
BP GO:0080134 regulation of response to stress IEP Enrichment
BP GO:0080135 regulation of cellular response to stress IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:2001020 regulation of response to DNA damage stimulus IEP Enrichment
InterPro domains Description Start Stop
IPR017961 DNA_pol_Y-fam_little_finger 237 341
IPR024728 PolY_HhH_motif 169 197
IPR001126 UmuC 7 154
No external refs found!