AGT26005 (N559_4395)

Aliases : N559_4395

Description : Citrate lyase alpha chain [Ensembl].

Gene families : OG_02_0001394 (OrthoFinder) Phylogenetic Tree(s): OG0001394_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AGT26005
Cluster	HCCA: Cluster_18

Target	Alias	Description	ECC score	Gene Family Method
AAC73716	citF, b0615	citrate lyase, citrate-ACP transferase (alpha) subunit...	0.07	OrthoFinder
AAL19025	STM0061, citF2	putative citrate lyase alpha chain [Ensembl]. Citrate...	0.06	OrthoFinder
AAL19572	STM0621, citF	citrate lyase alpha chain [Ensembl]. Citrate lyase...	0.1	OrthoFinder
AEA95251	citF, OG1RF_12564	citrate (pro-3S)-lyase [Ensembl]. Citrate lyase [Interproscan].	0.06	OrthoFinder
CCG26175	No alias	Citrate lyase alpha chain [Ensembl]. Citrate lyase...	0.08	OrthoFinder
EDJ91262	CGSHi22421_02049	citrate lyase alpha chain [Ensembl]. Citrate lyase...	0.05	OrthoFinder
KNA56909	VCV51_030541	citrate lyase [Ensembl]. Citrate lyase [Interproscan].	0.15	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	Interproscan
BP	GO:0006084	acetyl-CoA metabolic process	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006637	acyl-CoA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008410	CoA-transferase activity	None	Extended
MF	GO:0008814	citrate CoA-transferase activity	IEA	Interproscan
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
CC	GO:0009346	ATP-independent citrate lyase complex	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016782	transferase activity, transferring sulphur-containing groups	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033865	nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0035383	thioester metabolic process	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004590	orotidine-5'-phosphate decarboxylase activity	IEP	Enrichment
MF	GO:0005351	carbohydrate:proton symporter activity	IEP	Enrichment
MF	GO:0005402	carbohydrate:cation symporter activity	IEP	Enrichment
BP	GO:0006206	pyrimidine nucleobase metabolic process	IEP	Enrichment
BP	GO:0006207	'de novo' pyrimidine nucleobase biosynthetic process	IEP	Enrichment
BP	GO:0006811	ion transport	IEP	Enrichment
BP	GO:0006814	sodium ion transport	IEP	Enrichment
MF	GO:0008198	ferrous iron binding	IEP	Enrichment
MF	GO:0008324	cation transmembrane transporter activity	IEP	Enrichment
MF	GO:0008704	5-carboxymethyl-2-hydroxymuconate delta-isomerase activity	IEP	Enrichment
MF	GO:0008771	[citrate (pro-3S)-lyase] ligase activity	IEP	Enrichment
MF	GO:0008948	oxaloacetate decarboxylase activity	IEP	Enrichment
BP	GO:0009056	catabolic process	IEP	Enrichment
BP	GO:0009112	nucleobase metabolic process	IEP	Enrichment
MF	GO:0015075	ion transmembrane transporter activity	IEP	Enrichment
MF	GO:0015081	sodium ion transmembrane transporter activity	IEP	Enrichment
MF	GO:0015295	solute:proton symporter activity	IEP	Enrichment
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	IEP	Enrichment
MF	GO:0016829	lyase activity	IEP	Enrichment
MF	GO:0016830	carbon-carbon lyase activity	IEP	Enrichment
MF	GO:0016831	carboxy-lyase activity	IEP	Enrichment
MF	GO:0016863	intramolecular oxidoreductase activity, transposing C=C bonds	IEP	Enrichment
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	Enrichment
MF	GO:0016878	acid-thiol ligase activity	IEP	Enrichment
BP	GO:0019856	pyrimidine nucleobase biosynthetic process	IEP	Enrichment
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Enrichment
BP	GO:0035725	sodium ion transmembrane transport	IEP	Enrichment
BP	GO:0036376	sodium ion export across plasma membrane	IEP	Enrichment
BP	GO:0046112	nucleobase biosynthetic process	IEP	Enrichment
MF	GO:0046917	triphosphoribosyl-dephospho-CoA synthase activity	IEP	Enrichment
BP	GO:0070839	metal ion export	IEP	Enrichment
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	Enrichment
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	Enrichment
BP	GO:0140115	export across plasma membrane	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR006472	Citrate_lyase_asu	40	504

External Links

No external refs found!

AGT26005 (N559_4395)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation