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  5. AGT26296

AGT26296 (N559_4704)


Aliases : N559_4704

Description : L-xylulose 5-phosphate 3-epimerase [Ensembl]. TIM barrel domain [InterProScan].


Gene families : OG_02_0001386 (OrthoFinder) Phylogenetic Tree(s): OG0001386_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT26296
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AAC77154 ulaE, b4197 L-xylulose 5-phosphate 3-epimerase [Ensembl]. Xylose... 0.06 OrthoFinder
AAL00648 spr1845, sga Hexulose-6-phosphate isomerase [Ensembl]. Xylose... 0.04 OrthoFinder
AAL22535 STM3676, sgbU putative 3-hexulose-6-phosphate isomerase [Ensembl].... 0.03 OrthoFinder
AAL23207 STM4387, sgaU putative hexulose-6-phosphate isomerase [Ensembl].... 0.09 OrthoFinder
AEA93595 sgbU, OG1RF_10908 L-ribulose-5-phosphate 3-epimerase [Ensembl]. Xylose... 0.07 OrthoFinder
CCG26478 No alias L-xylulose 5-phosphate 3-epimerase [Ensembl]. Xylose... 0.1 OrthoFinder
KNA52269 VCV51_033435 hexulose-6-phosphate isomerase [Ensembl]. Xylose... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0004565 beta-galactosidase activity IEP Enrichment
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Enrichment
MF GO:0005351 carbohydrate:proton symporter activity IEP Enrichment
MF GO:0005402 carbohydrate:cation symporter activity IEP Enrichment
BP GO:0006012 galactose metabolic process IEP Enrichment
BP GO:0006084 acetyl-CoA metabolic process IEP Enrichment
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Enrichment
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Enrichment
BP GO:0006637 acyl-CoA metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0006814 sodium ion transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0008410 CoA-transferase activity IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
MF GO:0008771 [citrate (pro-3S)-lyase] ligase activity IEP Enrichment
MF GO:0008814 citrate CoA-transferase activity IEP Enrichment
MF GO:0008887 glycerate kinase activity IEP Enrichment
MF GO:0008948 oxaloacetate decarboxylase activity IEP Enrichment
BP GO:0009112 nucleobase metabolic process IEP Enrichment
CC GO:0009341 beta-galactosidase complex IEP Enrichment
CC GO:0009346 ATP-independent citrate lyase complex IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
MF GO:0015081 sodium ion transmembrane transporter activity IEP Enrichment
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Enrichment
MF GO:0015294 solute:cation symporter activity IEP Enrichment
MF GO:0015295 solute:proton symporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
MF GO:0015925 galactosidase activity IEP Enrichment
MF GO:0015926 glucosidase activity IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0016878 acid-thiol ligase activity IEP Enrichment
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
BP GO:0031388 organic acid phosphorylation IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0035383 thioester metabolic process IEP Enrichment
BP GO:0035725 sodium ion transmembrane transport IEP Enrichment
BP GO:0036376 sodium ion export across plasma membrane IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046112 nucleobase biosynthetic process IEP Enrichment
MF GO:0046917 triphosphoribosyl-dephospho-CoA synthase activity IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0070839 metal ion export IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
BP GO:0140115 export across plasma membrane IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
InterPro domains Description Start Stop
IPR013022 Xyl_isomerase-like_TIM-brl 25 230
No external refs found!