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  5. AGT26395

AGT26395 (N559_4805)


Aliases : N559_4805

Description : putative ABC transporter [Ensembl].


Gene families : OG_02_0000062 (OrthoFinder) Phylogenetic Tree(s): OG0000062_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT26395
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AAC74586 lsrA, b1513 autoinducer 2 import ATP-binding protein [Ensembl]. ABC... 0.03 OrthoFinder
AAC74970 araG, b1900 L-arabinose ABC transporter ATPase [Ensembl]. ABC... 0.05 OrthoFinder
AAC75600 yphE, b2547 putative sugar ABC transporter ATPase [Ensembl]. ABC... 0.03 OrthoFinder
AAC76591 xylG, b3567 D-xylose ABC transporter dual domain ATPase [Ensembl].... 0.04 OrthoFinder
AAC76772 rbsA, b3749 D-ribose ABC transporter ATPase [Ensembl]. ABC... 0.03 OrthoFinder
AAC77048 alsA, b4087 D-allose ABC transporter ATPase [Ensembl]. ABC... 0.03 OrthoFinder
AAL21093 STM2189, mglA galactose (methyl-galactoside) transport protein... 0.06 OrthoFinder
AAL22740 STM3882, rbsA D-ribose high-affinity transport protein [Ensembl]. ABC... 0.04 OrthoFinder
AAT48244 ytfR, b4485 putative sugar ABC transporter ATPase [Ensembl]. ABC... 0.03 OrthoFinder
AEA92813 OG1RF_10126 ABC superfamily ATP binding cassette transporter, ABC... 0.03 OrthoFinder
AGT25325 N559_3685 putative ABC-type sugar transport system ATPase... 0.04 OrthoFinder
AGT25344 N559_3704 putative ABC transport system ATPase component [Ensembl]. 0.04 OrthoFinder
AGT25370 N559_3732 putative ribose ABC transport system ATP-binding... 0.04 OrthoFinder
AGT26698 N559_5124 D-ribose transporter ATP binding protein [Ensembl]. 0.03 OrthoFinder
CCL18507 rbsA, BN171_240012 ABC-type transport system, ribose-specific ATP-binding... 0.03 OrthoFinder
CRN86529 araG Arabinose import ATP-binding protein AraG [Ensembl]. ABC... 0.03 OrthoFinder
KNA60663 VCV51_032102 ribose ABC transporter ATP-binding protein [Ensembl].... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
MF GO:0008671 2-dehydro-3-deoxygalactonokinase activity IEP Enrichment
MF GO:0008733 L-arabinose isomerase activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015288 porin activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
BP GO:0019520 aldonic acid metabolic process IEP Enrichment
BP GO:0019583 galactonate metabolic process IEP Enrichment
BP GO:0019584 galactonate catabolic process IEP Enrichment
BP GO:0019634 organic phosphonate metabolic process IEP Enrichment
BP GO:0019700 organic phosphonate catabolic process IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022829 wide pore channel activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0034192 D-galactonate metabolic process IEP Enrichment
BP GO:0034194 D-galactonate catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044275 cellular carbohydrate catabolic process IEP Enrichment
BP GO:0046176 aldonic acid catabolic process IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 272 425
IPR003439 ABC_transporter-like_ATP-bd 22 171
No external refs found!