AGT26400 (N559_4812)

Aliases : N559_4812

Description : putative response regulator [Ensembl]. Response regulator receiver domain, OmpR/PhoB-type DNA-binding domain [InterProScan].

Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AGT26400
Cluster	HCCA: Cluster_19

Target	Alias	Description	ECC score	Gene Family Method
AAC73672	cusR, b0571	response regulator in two-component regulatory system...	0.01	OrthoFinder
AAC76430	ompR, b3405	response regulator in two-component regulatory system...	0.04	OrthoFinder
AKI49504	L2625_01607	DNA-binding response regulator [Ensembl]. Signal...	0.04	OrthoFinder
AKP15489	ompR, WX61_01443	Transcriptional regulatory protein OmpR [Ensembl]....	0.02	OrthoFinder
CCL20251	BN171_390005	Two-component response regulator [Ensembl]. Response...	0.05	OrthoFinder
CPC86428	phoP, ERS093114_01516	Alkaline phosphatase synthesis transcriptional...	0.03	OrthoFinder
CRO55563	arcA_1	Dye resistance protein [Ensembl]. Response regulator...	0.02	OrthoFinder
KNA52268	VCV51_033433	response regulator receiver domain-containing protein...	0.04	OrthoFinder
KNA54887	VCV51_031804	response regulator receiver domain-containing protein...	0.03	OrthoFinder
KNA60550	VCV51_032221	response regulator receiver domain-containing protein...	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000062	fatty-acyl-CoA binding	IEP	Enrichment
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Enrichment
MF	GO:0004612	phosphoenolpyruvate carboxykinase (ATP) activity	IEP	Enrichment
BP	GO:0006835	dicarboxylic acid transport	IEP	Enrichment
MF	GO:0008080	N-acetyltransferase activity	IEP	Enrichment
MF	GO:0008134	transcription factor binding	IEP	Enrichment
MF	GO:0008514	organic anion transmembrane transporter activity	IEP	Enrichment
BP	GO:0008643	carbohydrate transport	IEP	Enrichment
MF	GO:0008982	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity	IEP	Enrichment
BP	GO:0009401	phosphoenolpyruvate-dependent sugar phosphotransferase system	IEP	Enrichment
BP	GO:0010565	regulation of cellular ketone metabolic process	IEP	Enrichment
MF	GO:0015144	carbohydrate transmembrane transporter activity	IEP	Enrichment
MF	GO:0015556	C4-dicarboxylate transmembrane transporter activity	IEP	Enrichment
BP	GO:0015711	organic anion transport	IEP	Enrichment
BP	GO:0015740	C4-dicarboxylate transport	IEP	Enrichment
MF	GO:0016407	acetyltransferase activity	IEP	Enrichment
MF	GO:0016410	N-acyltransferase activity	IEP	Enrichment
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Enrichment
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Enrichment
BP	GO:0019216	regulation of lipid metabolic process	IEP	Enrichment
BP	GO:0019217	regulation of fatty acid metabolic process	IEP	Enrichment
MF	GO:0022804	active transmembrane transporter activity	IEP	Enrichment
MF	GO:0043565	sequence-specific DNA binding	IEP	Enrichment
BP	GO:0046942	carboxylic acid transport	IEP	Enrichment
BP	GO:0062012	regulation of small molecule metabolic process	IEP	Enrichment
BP	GO:0071702	organic substance transport	IEP	Enrichment
MF	GO:0120227	acyl-CoA binding	IEP	Enrichment
MF	GO:0140110	transcription regulator activity	IEP	Enrichment
MF	GO:1901567	fatty acid derivative binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001867	OmpR/PhoB-type_DNA-bd	156	231
IPR001789	Sig_transdc_resp-reg_receiver	5	115

External Links

No external refs found!

AGT26400 (N559_4812)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation