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  5. AGT26424

AGT26424 (N559_4840)


Aliases : N559_4840

Description : putrescine/spermidine ABC transporter ATPase [Ensembl].


Gene families : OG_02_0000010 (OrthoFinder) Phylogenetic Tree(s): OG0000010_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT26424
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AAC76475 ugpC, b3450 sn-glycerol-3-phosphate ABC transporter ATPase... 0.03 OrthoFinder
AGT23238 N559_1485 sulfate/thiosulfate transporter subunit [Ensembl].... 0.05 OrthoFinder
CRO93099 potA_5 Spermidine/putrescine import ATP-binding protein PotA... 0.05 OrthoFinder
CRP16786 tauB_1 Taurine import ATP-binding protein TauB [Ensembl]. ABC... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
MF GO:0008198 ferrous iron binding IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
BP GO:0009166 nucleotide catabolic process IEP Enrichment
CC GO:0009289 pilus IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0019700 organic phosphonate catabolic process IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0030288 outer membrane-bounded periplasmic space IEP Enrichment
CC GO:0042597 periplasmic space IEP Enrichment
CC GO:0042995 cell projection IEP Enrichment
BP GO:0045229 external encapsulating structure organization IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071555 cell wall organization IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 29 171
No external refs found!