AGT26505 (N559_4921, ThiC)

Aliases : N559_4921, ThiC

Description : thiamine biosynthesis protein ThiC [Ensembl]. ThiC-associated domain, Radical SAM ThiC family [InterProScan].

Gene families : OG_02_0001139 (OrthoFinder) Phylogenetic Tree(s): OG0001139_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AGT26505
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AAC76968 thiC, b3994 phosphomethylpyrimidine synthase [Ensembl].... 0.09 OrthoFinder
AAL22992 STM4164, thiC 5'-phosphoryl-5-aminoimidazole [Ensembl].... 0.07 OrthoFinder
CCL17913 thiC, BN171_1940002 Thiamine biosynthesis protein ThiC [Ensembl]. Radical... 0.09 OrthoFinder
KNA53563 VCV51_030044 ThiC family protein [Ensembl]. ThiC-associated domain,... 0.08 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0009228 thiamine biosynthetic process IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004417 hydroxyethylthiazole kinase activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
CC GO:0009279 cell outer membrane IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0050498 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, with 2-oxoglutarate as one donor, and the other dehydrogenated IEP Enrichment
InterPro domains Description Start Stop
IPR002817 ThiC/BzaA/B 148 596
IPR025747 ThiC-associated_dom 27 107
No external refs found!