AGT26518 (N559_4934)

Aliases : N559_4934

Description : 50S ribosomal protein L7/L12 [Ensembl]. Ribosomal protein L7/L12 C-terminal domain, Ribosomal protein L7/L12 dimerisation domain [InterProScan].

Gene families : OG_02_0000364 (OrthoFinder) Phylogenetic Tree(s): OG0000364_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AGT26518
Cluster	HCCA: Cluster_12

Target	Alias	Description	ECC score	Gene Family Method
AAC76960	rplL, b3986	50S ribosomal subunit protein L7/L12 [Ensembl]....	0.16	OrthoFinder
AAL00015	spr1211, rplL	50S Ribosomal protein L12 [Ensembl]. Ribosomal protein...	0.09	OrthoFinder
AAL22980	STM4152, rplL	50S ribosomal subunit protein L7/L12 [Ensembl]....	0.26	OrthoFinder
ADK86807	rplL, MPNE_0637	ribosomal protein L7/L12 [Ensembl]. Ribosomal protein...	0.02	OrthoFinder
AEA94767	rplL2, OG1RF_12080	ribosomal protein L7/L12 [Ensembl]. Ribosomal protein...	0.14	OrthoFinder
AHY39730	rplL, CJ8421_02385	50S ribosomal protein L7/L12 [Ensembl]. Ribosomal...	0.13	OrthoFinder
AKI48218	rplL, L2625_00269	ribosomal protein L7/L12 [Ensembl]. Ribosomal protein...	0.08	OrthoFinder
AKP15110	rplL, WX61_01056	50S ribosomal protein L7/L12 [Ensembl]. Ribosomal...	0.11	OrthoFinder
CBI65849	rplL, HPB8_292	large subunit ribosomal protein L7/L12 [Ensembl]....	0.17	OrthoFinder
CCG27670	P1/P2	LSU ribosomal protein L7/L12 (P1/P2) [Ensembl]....	0.05	OrthoFinder
CCL20642	rplL, BN171_80007	50S ribosomal protein L7/L12 [Ensembl]. Ribosomal...	0.08	OrthoFinder
CCP43395	rplL, Rv0652	50S ribosomal protein L7/L12 RplL (SA1) [Ensembl]....	0.06	OrthoFinder
CPC57334	rplL, ERS093114_00838	50S ribosomalprotein L7/L12 (L23e) [Ensembl]. Ribosomal...	0.18	OrthoFinder
CRO73528	rplL	Ribosomal protein 'A' [Ensembl]. Ribosomal protein...	0.2	OrthoFinder
EDJ90229	rplL, CGSHi22421_05057	50S ribosomal protein L7/L12 [Ensembl]. Ribosomal...	0.04	OrthoFinder
KNA49129	VCV51_030231	ribosomal protein L7/L12 [Ensembl]. Ribosomal protein...	0.17	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0002161	aminoacyl-tRNA editing activity	IEP	Enrichment
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003723	RNA binding	IEP	Enrichment
MF	GO:0003746	translation elongation factor activity	IEP	Enrichment
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	Enrichment
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Enrichment
MF	GO:0004814	arginine-tRNA ligase activity	IEP	Enrichment
MF	GO:0005488	binding	IEP	Enrichment
BP	GO:0006082	organic acid metabolic process	IEP	Enrichment
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Enrichment
BP	GO:0006351	transcription, DNA-templated	IEP	Enrichment
BP	GO:0006399	tRNA metabolic process	IEP	Enrichment
BP	GO:0006414	translational elongation	IEP	Enrichment
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Enrichment
BP	GO:0006420	arginyl-tRNA aminoacylation	IEP	Enrichment
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Enrichment
BP	GO:0008104	protein localization	IEP	Enrichment
BP	GO:0015031	protein transport	IEP	Enrichment
BP	GO:0016070	RNA metabolic process	IEP	Enrichment
MF	GO:0016779	nucleotidyltransferase activity	IEP	Enrichment
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Enrichment
BP	GO:0018130	heterocycle biosynthetic process	IEP	Enrichment
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Enrichment
BP	GO:0019752	carboxylic acid metabolic process	IEP	Enrichment
MF	GO:0019843	rRNA binding	IEP	Enrichment
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Enrichment
BP	GO:0031554	regulation of DNA-templated transcription, termination	IEP	Enrichment
BP	GO:0032774	RNA biosynthetic process	IEP	Enrichment
BP	GO:0033036	macromolecule localization	IEP	Enrichment
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	Enrichment
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Enrichment
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Enrichment
BP	GO:0034660	ncRNA metabolic process	IEP	Enrichment
BP	GO:0042254	ribosome biogenesis	IEP	Enrichment
BP	GO:0043038	amino acid activation	IEP	Enrichment
BP	GO:0043039	tRNA aminoacylation	IEP	Enrichment
BP	GO:0043244	regulation of protein-containing complex disassembly	IEP	Enrichment
BP	GO:0043436	oxoacid metabolic process	IEP	Enrichment
BP	GO:0044085	cellular component biogenesis	IEP	Enrichment
BP	GO:0045184	establishment of protein localization	IEP	Enrichment
BP	GO:0046483	heterocycle metabolic process	IEP	Enrichment
BP	GO:0051128	regulation of cellular component organization	IEP	Enrichment
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Enrichment
BP	GO:0090304	nucleic acid metabolic process	IEP	Enrichment
MF	GO:0097159	organic cyclic compound binding	IEP	Enrichment
BP	GO:0097659	nucleic acid-templated transcription	IEP	Enrichment
MF	GO:0097747	RNA polymerase activity	IEP	Enrichment
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Enrichment
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Enrichment
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Enrichment
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Enrichment
MF	GO:1901363	heterocyclic compound binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR013823	Ribosomal_L7/L12_C	38	104
IPR008932	Ribosomal_L7/L12_oligo	1	32

External Links

No external refs found!

AGT26518 (N559_4934)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation