AGT26554 (N559_4972, RecQ)


Aliases : N559_4972, RecQ

Description : ATP-dependent DNA helicase RecQ [Ensembl]. Helicase conserved C-terminal domain, RQC domain, HRDC domain, zinc-binding domain, DEAD/DEAH box helicase domain [InterProScan].


Gene families : OG_02_0000850 (OrthoFinder) Phylogenetic Tree(s): OG0000850_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT26554
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AAL22802 STM3958, recQ ATP-dependent DNA helicase [Ensembl]. RQC domain, HRDC... 0.11 OrthoFinder
AAT48221 recQ, b3822 ATP-dependent DNA helicase [Ensembl]. RQC domain, HRDC... 0.09 OrthoFinder
AKI50694 recQ, L2625_02909 ATP-dependent DNA helicase [Ensembl]. ATP-dependent DNA... 0.05 OrthoFinder
CPC50033 recQ_1, ERS093114_00632 ATP-dependent DNA helicase RecQ [Ensembl]. RQC domain,... 0.02 OrthoFinder
CRO30855 recQ ATP-dependent DNA helicase RecQ [Ensembl]. RQC domain,... 0.06 OrthoFinder
KNA52470 VCV51_030133, RecQ ATP-dependent DNA helicase RecQ [Ensembl]. RQC domain,... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
BP GO:0006281 DNA repair IEA Interproscan
MF GO:0043138 3'-5' DNA helicase activity IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003883 CTP synthase activity IEP Enrichment
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Enrichment
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0006743 ubiquinone metabolic process IEP Enrichment
BP GO:0006744 ubiquinone biosynthetic process IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
MF GO:0008144 drug binding IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
BP GO:0008272 sulfate transport IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
MF GO:0008658 penicillin binding IEP Enrichment
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Enrichment
MF GO:0008813 chorismate lyase activity IEP Enrichment
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP Enrichment
MF GO:0008915 lipid-A-disaccharide synthase activity IEP Enrichment
MF GO:0008939 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity IEP Enrichment
BP GO:0009143 nucleoside triphosphate catabolic process IEP Enrichment
BP GO:0009254 peptidoglycan turnover IEP Enrichment
CC GO:0009295 nucleoid IEP Enrichment
MF GO:0009378 four-way junction helicase activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
MF GO:0015116 sulfate transmembrane transporter activity IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016744 transketolase or transaldolase activity IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016833 oxo-acid-lyase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0033293 monocarboxylic acid binding IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
BP GO:0042180 cellular ketone metabolic process IEP Enrichment
BP GO:0042181 ketone biosynthetic process IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0072348 sulfur compound transport IEP Enrichment
BP GO:1901661 quinone metabolic process IEP Enrichment
BP GO:1901663 quinone biosynthetic process IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR001650 Helicase_C 177 284
IPR032284 RecQ_Zn-bd 297 358
IPR018982 RQC_domain 360 468
IPR011545 DEAD/DEAH_box_helicase_dom 1 141
IPR002121 HRDC_dom 487 553
No external refs found!