AGT26875 (N559_5301, CusR)


Aliases : N559_5301, CusR

Description : DNA-binding transcriptional activator CusR [Ensembl]. Response regulator receiver domain, OmpR/PhoB-type DNA-binding domain [InterProScan].


Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT26875
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AAC76061 qseB, b3025 quorum sensing DNA-binding response regulator in... 0.03 OrthoFinder
AHY40431 CJ8421_06120 DNA-binding response regulator [Ensembl].... 0.02 OrthoFinder
CBI66957 ompR3, HPB8_1400 two-component system, OmpR family, response regulator... 0.02 OrthoFinder
CBI67093 HPB8_1536 two-component system, OmpR family, response regulator... 0.03 OrthoFinder
CCL18215 BN171_2170002 Two-component response regulator [Ensembl]. Response... 0.03 OrthoFinder
CPC31435 arlR, ERS093114_00002 Putative response regulator ArlR [Ensembl].... 0.05 OrthoFinder
CPC70217 vicR, ERS093114_01104 Two-component response regulator [Ensembl].... 0.03 OrthoFinder
CRN77914 cusR Transcriptional regulatory protein CusR [Ensembl].... 0.07 OrthoFinder
CRO52494 czcR_1 Transcriptional activator protein CzcR [Ensembl].... 0.03 OrthoFinder
CRO55563 arcA_1 Dye resistance protein [Ensembl]. Response regulator... 0.04 OrthoFinder
CRP18948 ompR_3 Transcriptional regulatory protein OmpR [Ensembl].... 0.04 OrthoFinder
CRP58313 czcR_4 Transcriptional activator protein CzcR [Ensembl].... 0.03 OrthoFinder
KNA55120 VCV51_031823 response regulator receiver domain-containing protein... 0.03 OrthoFinder
KNA55649 VCV51_033016 response regulator receiver domain-containing protein... 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
MF GO:0004146 dihydrofolate reductase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
MF GO:0004803 transposase activity IEP Enrichment
MF GO:0005351 carbohydrate:proton symporter activity IEP Enrichment
MF GO:0005402 carbohydrate:cation symporter activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006313 transposition, DNA-mediated IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006760 folic acid-containing compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008987 quinolinate synthetase A activity IEP Enrichment
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Enrichment
BP GO:0009435 NAD biosynthetic process IEP Enrichment
BP GO:0009890 negative regulation of biosynthetic process IEP Enrichment
BP GO:0009892 negative regulation of metabolic process IEP Enrichment
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010038 response to metal ion IEP Enrichment
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
MF GO:0015105 arsenite transmembrane transporter activity IEP Enrichment
MF GO:0015295 solute:proton symporter activity IEP Enrichment
BP GO:0015700 arsenite transport IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0016987 sigma factor activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0031324 negative regulation of cellular metabolic process IEP Enrichment
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Enrichment
BP GO:0032196 transposition IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Enrichment
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
BP GO:0046653 tetrahydrofolate metabolic process IEP Enrichment
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Enrichment
BP GO:0046685 response to arsenic-containing substance IEP Enrichment
BP GO:0046688 response to copper ion IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051253 negative regulation of RNA metabolic process IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Enrichment
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 3 113
IPR001867 OmpR/PhoB-type_DNA-bd 146 221
No external refs found!