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  5. CCL17442

CCL17442 (BN171_1500018)


Aliases : BN171_1500018

Description : Putative replication-associated recombination protein A RarA [Ensembl]. Holliday junction DNA helicase RuvB P-loop domain, AAA C-terminal domain, MgsA AAA+ ATPase C terminal [Interproscan].


Gene families : OG_02_0000427 (OrthoFinder) Phylogenetic Tree(s): OG0000427_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL17442
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AAC73978 rarA, b0892 recombination intermediate processing DNA-dependent... 0.07 OrthoFinder
AAL19897 STM0962, ycaJ putative polynucleotide enzyme [Ensembl]. AAA C-terminal... 0.04 OrthoFinder
AHY39467 CJ8421_01000 recombination factor protein RarA [Ensembl]. AAA... 0.03 OrthoFinder
AKP14090 rarA, WX61_00001 Replication-associated recombination protein A... 0.03 OrthoFinder
EDJ90946 CGSHi22421_03818 predicted ATPase [Ensembl]. AAA C-terminal domain, MgsA... 0.03 OrthoFinder
KNA54694 VCV51_030778 ATPase [Ensembl]. AAA C-terminal domain, MgsA AAA+... 0.05 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006281 DNA repair IEA Interproscan
BP GO:0006310 DNA recombination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004055 argininosuccinate synthase activity IEP Enrichment
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004529 exodeoxyribonuclease activity IEP Enrichment
MF GO:0004536 deoxyribonuclease activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
CC GO:0005887 integral component of plasma membrane IEP Enrichment
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0007267 cell-cell signaling IEP Enrichment
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Enrichment
MF GO:0008855 exodeoxyribonuclease VII activity IEP Enrichment
MF GO:0008961 phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity IEP Enrichment
BP GO:0009372 quorum sensing IEP Enrichment
MF GO:0009378 four-way junction helicase activity IEP Enrichment
BP GO:0009405 obsolete pathogenesis IEP Enrichment
BP GO:0009595 detection of biotic stimulus IEP Enrichment
BP GO:0009607 response to biotic stimulus IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016744 transketolase or transaldolase activity IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0023052 signaling IEP Enrichment
BP GO:0030258 lipid modification IEP Enrichment
BP GO:0030259 lipid glycosylation IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
CC GO:0031226 intrinsic component of plasma membrane IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0044764 multi-organism cellular process IEP Enrichment
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP Enrichment
BP GO:0051606 detection of stimulus IEP Enrichment
BP GO:0051704 multi-organism process IEP Enrichment
BP GO:0052646 alditol phosphate metabolic process IEP Enrichment
BP GO:0060245 detection of cell density IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:1901136 carbohydrate derivative catabolic process IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR032423 AAA_assoc_2 174 252
IPR008824 RuvB-like_N 7 126
IPR021886 MgsA_C 253 417
UniProtKB U3WTS0