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  5. CCL17475

CCL17475 (dnaF, BN171_1510017)


Aliases : dnaF, BN171_1510017

Description : DNA polymerase III PolC-type (PolIII) [Ensembl]. DNA polymerase III polC-type N-terminus I, DNA polymerase III polC-type N-terminus II, Bacterial DNA polymerase III alpha NTPase domain, Exonuclease, PHP domain, Helix-hairpin-helix motif, Bacterial DNA polymerase III alpha subunit finger domain [Interproscan].


Gene families : OG_02_0001788 (OrthoFinder) Phylogenetic Tree(s): OG0001788_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL17475
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AEA94498 polC, OG1RF_11811 DNA polymerase III PolC [Ensembl]. PHP domain,... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
MF GO:0008408 3'-5' exonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0004127 cytidylate kinase activity IEP Enrichment
MF GO:0004668 protein-arginine deiminase activity IEP Enrichment
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006081 cellular aldehyde metabolic process IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Enrichment
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Enrichment
MF GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019205 nucleobase-containing compound kinase activity IEP Enrichment
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Enrichment
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Enrichment
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Enrichment
MF GO:0050145 nucleoside monophosphate kinase activity IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Enrichment
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR004013 PHP_dom 334 689
IPR013520 Exonuclease_RNaseT/DNA_pol3 419 573
IPR029460 DNAPol_HHH 1343 1428
IPR011708 DNA_pol3_alpha_NTPase_dom 817 1001
IPR011708 DNA_pol3_alpha_NTPase_dom 1019 1088
IPR024754 DNA_PolC-like_N_II 91 212
IPR040982 DNA_pol3_finger 1092 1240
IPR028112 DNA_PolC-type_N_I 4 75
UniProtKB U3WUT0