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  5. AKI50500

AKI50500 (L2625_02690)


Aliases : L2625_02690

Description : bacterial extracellular solute-binding protein, family 5 [Ensembl]. Solute-binding protein family 5 domain [Interproscan].


Gene families : OG_02_0000186 (OrthoFinder) Phylogenetic Tree(s): OG0000186_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AKI50500
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AAC74325 oppA, b1243 oligopeptide ABC transporter periplasmic binding protein... 0.05 OrthoFinder
AEA92744 OG1RF_10057 oligopeptide ABC superfamily ATP binding cassette... 0.02 OrthoFinder
AEA93321 opp1A, OG1RF_10634 oligopeptide ABC superfamily ATP binding cassette... 0.07 OrthoFinder
AEA94998 traC2, OG1RF_12311 peptide ABC superfamily ATP binding cassette... 0.06 OrthoFinder
AGT23802 N559_2084 oligopeptide ABC transporter periplasmic... 0.04 OrthoFinder
AGT24938 N559_3280 putative extracellular solute-binding protein [Ensembl].... 0.03 OrthoFinder
CPC43788 oppA_2, ERS093114_00439 Oligopeptide ABC transporter%2C periplasmic... 0.03 OrthoFinder
EDJ91927 oppB, CGSHi22421_09228 oligopeptide permease ABC transporter membrane protein... 0.04 OrthoFinder
KNA54677 VCV51_030763 bacterial extracellular solute-binding protein, family 5... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004814 arginine-tRNA ligase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006420 arginyl-tRNA aminoacylation IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1904949 ATPase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR000914 SBP_5_dom 87 472
No external refs found!