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  5. CCL17760

CCL17760 (sigV, BN171_1770004)


Aliases : sigV, BN171_1770004

Description : RNA polymerase sigma-70 factor [Ensembl]. Sigma-70, Sigma-70 region 2 [Interproscan].


Gene families : OG_02_0000184 (OrthoFinder) Phylogenetic Tree(s): OG0000184_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL17760
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AEA95135 OG1RF_12448 RNA polymerase sigma-70 factor [Ensembl]. Sigma-70... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006352 DNA-templated transcription, initiation IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR007627 RNA_pol_sigma70_r2 18 80
IPR013249 RNA_pol_sigma70_r4_t2 103 154
UniProtKB U3WVJ7