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  5. CCL17792

CCL17792 (BN171_1800015)


Aliases : BN171_1800015

Description : ABC-type transport system, sugar-family permease [Ensembl]. Branched-chain amino acid transport system / permease component [Interproscan].


Gene families : OG_02_0000052 (OrthoFinder) Phylogenetic Tree(s): OG0000052_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL17792
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AAC76592 xylH, b3568 D-xylose ABC transporter permease [Ensembl].... 0.02 OrthoFinder
AAC76773 rbsC, b3750 D-ribose ABC transporter permease [Ensembl].... 0.04 OrthoFinder
AGT24251 N559_2570 putative ribose/xylose/arabinose/galactoside ABC-type... 0.03 OrthoFinder
AGT25371 N559_3733 sugar ABC transporter permease [Ensembl]. 0.02 OrthoFinder
AGT25473 N559_3837 sugar ABC transport system permease component [Ensembl]. 0.03 OrthoFinder
AGT26266 N559_4672, YjfF inner membrane ABC transporter permease YjfF [Ensembl]. 0.03 OrthoFinder
AGT26697 N559_5123 ribose ABC transporter permease protein [Ensembl]. 0.03 OrthoFinder
CRN86499 rbsC Ribose transport system permease protein RbsC [Ensembl].... 0.04 OrthoFinder
EDJ91405 CGSHi22421_04858 beta-methylgalactoside transporter inner membrane... 0.04 OrthoFinder
EDJ91906 CGSHi22421_09123 D-xylose ABC transporter permease protein [Ensembl].... 0.03 OrthoFinder
EDJ91907 CGSHi22421_09128 D-xylose ABC transporter permease protein [Ensembl].... 0.03 OrthoFinder
KNA60662 VCV51_032101 branched-chain amino acid transport system/permease... 0.04 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
MF GO:0001216 DNA-binding transcription activator activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004359 glutaminase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Enrichment
MF GO:0016987 sigma factor activity IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0045229 external encapsulating structure organization IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071555 cell wall organization IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
InterPro domains Description Start Stop
IPR001851 ABC_transp_permease 38 303
UniProtKB U3WUS9