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  5. AKP14148

AKP14148 (truB, WX61_00059)


Aliases : truB, WX61_00059

Description : tRNA pseudouridine synthase B [Ensembl]. Pseudouridine synthase II TruB, tRNA pseudouridylate synthase B C-terminal domain, TruB family pseudouridylate synthase (N terminal domain) [Interproscan].


Gene families : OG_02_0000639 (OrthoFinder) Phylogenetic Tree(s): OG0000639_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AKP14148
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AAC76200 truB, b3166 tRNA pseudouridine synthase B: tRNA pseudouridine(55)... 0.03 OrthoFinder
AEA93751 truB, OG1RF_11064 tRNA pseudouridine synthase B [Ensembl]. tRNA... 0.03 OrthoFinder
AHY40308 truB, CJ8421_05480 tRNA pseudouridine synthase B [Ensembl]. TruB family... 0.03 OrthoFinder
AKI49324 truB, L2625_01418 tRNA pseudouridine synthase B [Ensembl]. tRNA... 0.04 OrthoFinder
CCL17484 truB, BN171_1520002 tRNA pseudouridine synthase B [Ensembl]. TruB family... 0.03 OrthoFinder
CRO21120 truB tRNA pseudouridine synthase B [Ensembl]. Pseudouridine... 0.05 OrthoFinder
KNA57722 VCV51_030415 tRNA pseudouridine synthase B [Ensembl]. Pseudouridine... 0.04 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0006396 RNA processing IEA Interproscan
BP GO:0009451 RNA modification IEA Interproscan
MF GO:0009982 pseudouridine synthase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0002949 tRNA threonylcarbamoyladenosine modification IEP Enrichment
MF GO:0003951 NAD+ kinase activity IEP Enrichment
MF GO:0004107 chorismate synthase activity IEP Enrichment
MF GO:0004127 cytidylate kinase activity IEP Enrichment
MF GO:0004424 imidazoleglycerol-phosphate dehydratase activity IEP Enrichment
MF GO:0004448 isocitrate dehydrogenase activity IEP Enrichment
MF GO:0004450 isocitrate dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006741 NADP biosynthetic process IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
BP GO:0009143 nucleoside triphosphate catabolic process IEP Enrichment
CC GO:0009349 riboflavin synthase complex IEP Enrichment
BP GO:0009403 toxin biosynthetic process IEP Enrichment
BP GO:0009404 toxin metabolic process IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019748 secondary metabolic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0044550 secondary metabolite biosynthetic process IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
BP GO:0070525 tRNA threonylcarbamoyladenosine metabolic process IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR015240 tRNA_sdUridine_synth_fam1_C 241 297
IPR032819 TruB_C 180 237
IPR002501 PsdUridine_synth_N 32 179
No external refs found!