AKP15252 (mnmE, WX61_01203)

Aliases : mnmE, WX61_01203

Description : tRNA modification GTPase MnmE [Ensembl]. MnmE helical domain, 50S ribosome-binding GTPase, GTP-binding protein TrmE N-terminus [Interproscan].

Gene families : OG_02_0000630 (OrthoFinder) Phylogenetic Tree(s): OG0000630_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AKP15252
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AAC76729 mnmE, b3706 tRNA U34 5-methylaminomethyl-2-thiouridine modification... 0.03 OrthoFinder
AHY40170 trmE, CJ8421_04735 tRNA modification GTPase TrmE [Ensembl]. MnmE helical... 0.03 OrthoFinder
EDJ91803 CGSHi22421_08608 tRNA modification GTPase [Ensembl]. MnmE helical domain,... 0.06 OrthoFinder
KNA53809 VCV51_030001, TrmE tRNA modification GTPase TrmE [Ensembl]. MnmE helical... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
MF GO:0004089 carbonate dehydratase activity IEP Enrichment
MF GO:0004150 dihydroneopterin aldolase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008837 diaminopimelate epimerase activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010033 response to organic substance IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
MF GO:0047661 amino-acid racemase activity IEP Enrichment
BP GO:0051301 cell division IEP Enrichment
MF GO:0052855 ADP-dependent NAD(P)H-hydrate dehydratase activity IEP Enrichment
InterPro domains Description Start Stop
IPR006073 GTP-bd 218 320
IPR025867 MnmE_helical 123 445
IPR018948 GTP-bd_TrmE_N 7 120
No external refs found!