AKP15252 (mnmE, WX61_01203)

Aliases : mnmE, WX61_01203

Description : tRNA modification GTPase MnmE [Ensembl]. MnmE helical domain, 50S ribosome-binding GTPase, GTP-binding protein TrmE N-terminus [Interproscan].

Gene families : OG_02_0000630 (OrthoFinder) Phylogenetic Tree(s): OG0000630_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AKP15252
Cluster	HCCA: Cluster_8

Target	Alias	Description	ECC score	Gene Family Method
AAC76729	mnmE, b3706	tRNA U34 5-methylaminomethyl-2-thiouridine modification...	0.03	OrthoFinder
AHY40170	trmE, CJ8421_04735	tRNA modification GTPase TrmE [Ensembl]. MnmE helical...	0.03	OrthoFinder
EDJ91803	CGSHi22421_08608	tRNA modification GTPase [Ensembl]. MnmE helical domain,...	0.06	OrthoFinder
KNA53809	VCV51_030001, TrmE	tRNA modification GTPase TrmE [Ensembl]. MnmE helical...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003906	DNA-(apurinic or apyrimidinic site) endonuclease activity	IEP	Enrichment
MF	GO:0004089	carbonate dehydratase activity	IEP	Enrichment
MF	GO:0004150	dihydroneopterin aldolase activity	IEP	Enrichment
MF	GO:0005515	protein binding	IEP	Enrichment
BP	GO:0006289	nucleotide-excision repair	IEP	Enrichment
BP	GO:0006364	rRNA processing	IEP	Enrichment
BP	GO:0006813	potassium ion transport	IEP	Enrichment
MF	GO:0008168	methyltransferase activity	IEP	Enrichment
MF	GO:0008270	zinc ion binding	IEP	Enrichment
MF	GO:0008837	diaminopimelate epimerase activity	IEP	Enrichment
BP	GO:0009987	cellular process	IEP	Enrichment
BP	GO:0010033	response to organic substance	IEP	Enrichment
BP	GO:0016072	rRNA metabolic process	IEP	Enrichment
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Enrichment
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Enrichment
MF	GO:0016836	hydro-lyase activity	IEP	Enrichment
BP	GO:0042221	response to chemical	IEP	Enrichment
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	Enrichment
MF	GO:0047661	amino-acid racemase activity	IEP	Enrichment
BP	GO:0051301	cell division	IEP	Enrichment
MF	GO:0052855	ADP-dependent NAD(P)H-hydrate dehydratase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR006073	GTP-bd	218	320
IPR025867	MnmE_helical	123	445
IPR018948	GTP-bd_TrmE_N	7	120

External Links

No external refs found!

AKP15252 (mnmE, WX61_01203)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation