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  5. AAL19376

AAL19376 (STM0422, dxs)


Aliases : STM0422, dxs

Description : 1-deoxyxylulose-5-phosphate synthase; flavoprotein [Ensembl]. Transketolase, 1-deoxy-D-xylulose-5-phosphate synthase [Interproscan].


Gene families : OG_02_0000319 (OrthoFinder) Phylogenetic Tree(s): OG0000319_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL19376
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AGT25664 N559_4036 1-deoxy-D-xylulose-5-phosphate synthase [Ensembl].... 0.11 OrthoFinder
AHY39575 CJ8421_01590 1-deoxy-D-xylulose-5-phosphate synthase [Ensembl].... 0.02 OrthoFinder
AKI49361 dxs, L2625_01459 1-deoxy-D-xylulose-5-phosphate synthase [Ensembl].... 0.03 OrthoFinder
AKP15354 dxs, WX61_01306 1-deoxy-D-xylulose-5-phosphate synthase [Ensembl].... 0.06 OrthoFinder
CRP52225 dxs 1-deoxy-D-xylulose-5-phosphate synthase [Ensembl].... 0.05 OrthoFinder
EDJ91088 CGSHi22421_10117 1-deoxy-D-xylulose-5-phosphate synthase [Ensembl].... 0.04 OrthoFinder
KNA56281 VCV51_030599 1-deoxy-D-xylulose-5-phosphate synthase [Ensembl].... 0.1 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEA Interproscan
BP GO:0016114 terpenoid biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004418 hydroxymethylbilane synthase activity IEP Enrichment
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006081 cellular aldehyde metabolic process IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
MF GO:0008961 phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity IEP Enrichment
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Enrichment
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Enrichment
CC GO:0009279 cell outer membrane IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0010033 response to organic substance IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Enrichment
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
BP GO:0031167 rRNA methylation IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042157 lipoprotein metabolic process IEP Enrichment
BP GO:0042158 lipoprotein biosynthetic process IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP Enrichment
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Enrichment
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Enrichment
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
BP GO:0070475 rRNA base methylation IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR005477 Dxylulose-5-P_synthase 12 282
IPR033248 Transketolase_C 495 611
IPR005475 Transketolase-like_Pyr-bd 321 481
No external refs found!