1. Home
  2. Species
  3. Salmonella enterica
  4. Sequence
  5. AAL20380

AAL20380 (STM1458, ydgM)


Aliases : STM1458, ydgM

Description : putative alternative beta subunit of Na+-transporting NADH:ubiquinone oxidoreductase [Ensembl]. Putative Fe-S cluster, 4Fe-4S dicluster domain [Interproscan].


Gene families : OG_02_0001511 (OrthoFinder) Phylogenetic Tree(s): OG0001511_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL20380
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AAC74700 rsxB, b1628 SoxR iron-sulfur cluster reduction factor component;... 0.06 OrthoFinder
CCL17292 rnfB, BN171_1430019 Electron transport complex protein [Ensembl]. 4Fe-4S... 0.04 OrthoFinder
CRO09039 rnfB Nitrogen fixation protein rnfB [Ensembl]. Putative Fe-S... 0.02 OrthoFinder
EDJ90407 CGSHi22421_02376 electron transport complex protein RnfB [Ensembl].... 0.06 OrthoFinder
KNA54790 VCV51_033204 electron transport complex protein rnfB [Ensembl].... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004417 hydroxyethylthiazole kinase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006772 thiamine metabolic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008144 drug binding IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
BP GO:0008360 regulation of cell shape IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
MF GO:0008658 penicillin binding IEP Enrichment
MF GO:0008855 exodeoxyribonuclease VII activity IEP Enrichment
MF GO:0008962 phosphatidylglycerophosphatase activity IEP Enrichment
MF GO:0009020 tRNA (guanosine-2'-O-)-methyltransferase activity IEP Enrichment
MF GO:0009029 tetraacyldisaccharide 4'-kinase activity IEP Enrichment
BP GO:0009228 thiamine biosynthetic process IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Enrichment
BP GO:0022604 regulation of cell morphogenesis IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0033293 monocarboxylic acid binding IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042723 thiamine-containing compound metabolic process IEP Enrichment
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Enrichment
MF GO:0043138 3'-5' DNA helicase activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
BP GO:0050793 regulation of developmental process IEP Enrichment
MF GO:0062105 RNA 2'-O-methyltransferase activity IEP Enrichment
MF GO:0070567 cytidylyltransferase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0106050 tRNA 2'-O-methyltransferase activity IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR007202 4Fe-4S_dom 44 76
No external refs found!