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Aliases : nusB, CJ8421_01915
Description : transcription antitermination protein NusB [Ensembl]. NusB family [Interproscan].
Gene families : OG_02_0000793 (OrthoFinder) Phylogenetic Tree(s): OG0000793_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AHY39638 | |
| Cluster | HCCA: Cluster_8 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAK99194 | spr0390, nusB | Transcription termination protein [Ensembl]. NusB family... | 0.03 | OrthoFinder | |
| CCP45328 | nusB, Rv2533c | N utilization substance protein NusB (NusB protein)... | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Enrichment |
| BP | GO:0006082 | organic acid metabolic process | IEP | Enrichment |
| BP | GO:0006399 | tRNA metabolic process | IEP | Enrichment |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Enrichment |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Enrichment |
| MF | GO:0008236 | serine-type peptidase activity | IEP | Enrichment |
| BP | GO:0008643 | carbohydrate transport | IEP | Enrichment |
| MF | GO:0008685 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity | IEP | Enrichment |
| MF | GO:0009055 | electron transfer activity | IEP | Enrichment |
| MF | GO:0015144 | carbohydrate transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015159 | polysaccharide transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0015774 | polysaccharide transport | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Enrichment |
| MF | GO:0016849 | phosphorus-oxygen lyase activity | IEP | Enrichment |
| MF | GO:0016874 | ligase activity | IEP | Enrichment |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Enrichment |
| MF | GO:0017171 | serine hydrolase activity | IEP | Enrichment |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Enrichment |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
| BP | GO:0043038 | amino acid activation | IEP | Enrichment |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Enrichment |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Enrichment |
| MF | GO:0048038 | quinone binding | IEP | Enrichment |
| MF | GO:0070567 | cytidylyltransferase activity | IEP | Enrichment |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Enrichment |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006027 | NusB_RsmB_TIM44 | 6 | 128 |
| No external refs found! |