1. Home
  2. Species
  3. Salmonella enterica
  4. Sequence
  5. AAL22189

AAL22189 (STM3320, rpoN)


Aliases : STM3320, rpoN

Description : sigma N factor of RNA polymerase [Ensembl]. Sigma-54 factor [Interproscan].


Gene families : OG_02_0000919 (OrthoFinder) Phylogenetic Tree(s): OG0000919_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL22189
Cluster HCCA: Cluster_44


Type GO Term Name Evidence Source
MF GO:0001216 DNA-binding transcription activator activity IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006352 DNA-templated transcription, initiation IEA Interproscan
MF GO:0016987 sigma factor activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006323 DNA packaging IEP Enrichment
BP GO:0006553 lysine metabolic process IEP Enrichment
BP GO:0007059 chromosome segregation IEP Enrichment
MF GO:0008817 cob(I)yrinic acid a,c-diamide adenosyltransferase activity IEP Enrichment
MF GO:0008837 diaminopimelate epimerase activity IEP Enrichment
BP GO:0009085 lysine biosynthetic process IEP Enrichment
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Enrichment
CC GO:0009295 nucleoid IEP Enrichment
CC GO:0009360 DNA polymerase III complex IEP Enrichment
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0030261 chromosome condensation IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Enrichment
CC GO:0042575 DNA polymerase complex IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043900 regulation of multi-organism process IEP Enrichment
BP GO:0046451 diaminopimelate metabolic process IEP Enrichment
BP GO:0046999 regulation of conjugation IEP Enrichment
MF GO:0047661 amino-acid racemase activity IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR007046 RNA_pol_sigma_54_core-bd 114 303
IPR000394 RNA_pol_sigma_54 5 48
IPR007634 RNA_pol_sigma_54_DNA-bd 317 475
No external refs found!