AAL22197 (STM3328, arcB)


Aliases : STM3328, arcB

Description : sensory histidine kinase in two-component regulatory system with ArcA [Ensembl]. PAS fold, Hpt domain, Histidine kinase-, Response regulator receiver domain, His Kinase A (phospho-acceptor) domain, Histidine kinase receptor ArcB trans-membrane domain [Interproscan].


Gene families : OG_02_0000000 (OrthoFinder) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL22197
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
CCG27643 No alias Two-component sensor kinase SA14-24 [Ensembl]. PAS fold,... 0.03 OrthoFinder
CCL19031 BN171_2820001 Two-component sensor histidine kinase [Ensembl]. His... 0.03 OrthoFinder
CCL19098 BN171_2870028 Two-component sensor histidine kinase [Ensembl]. HAMP... 0.03 OrthoFinder
CCP46064 mtrB, Rv3245c Two component sensory transduction histidine kinase MtrB... 0.02 OrthoFinder
CRN75341 cusS_1 Sensor kinase CusS [Ensembl]. HAMP domain, Histidine... 0.01 OrthoFinder
CRP07564 cusS_3 Sensor kinase CusS [Ensembl]. HAMP domain, Histidine... 0.02 OrthoFinder
CRP23335 rcsC_2 Sensor kinase protein RcsC [Ensembl]. Histidine kinase-,... 0.01 OrthoFinder
EDJ89943 CGSHi22421_01087 aerobic respiration control sensor protein ArcB... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0003951 NAD+ kinase activity IEP Enrichment
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Enrichment
MF GO:0004797 thymidine kinase activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006741 NADP biosynthetic process IEP Enrichment
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019136 deoxynucleoside kinase activity IEP Enrichment
MF GO:0019205 nucleobase-containing compound kinase activity IEP Enrichment
MF GO:0019206 nucleoside kinase activity IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
InterPro domains Description Start Stop
IPR003661 HisK_dim/P 283 346
IPR040642 HKR_ArcB_TM 15 89
IPR008207 Sig_transdc_His_kin_Hpt_dom 686 757
IPR001789 Sig_transdc_resp-reg_receiver 528 639
IPR003594 HATPase_C 395 504
IPR013767 PAS_fold 156 266
No external refs found!