AAL22197 (STM3328, arcB)

Aliases : STM3328, arcB

Description : sensory histidine kinase in two-component regulatory system with ArcA [Ensembl]. PAS fold, Hpt domain, Histidine kinase-, Response regulator receiver domain, His Kinase A (phospho-acceptor) domain, Histidine kinase receptor ArcB trans-membrane domain [Interproscan].

Gene families : OG_02_0000000 (OrthoFinder) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AAL22197
Cluster	HCCA: Cluster_34

Target	Alias	Description	ECC score	Gene Family Method
CCG27643	No alias	Two-component sensor kinase SA14-24 [Ensembl]. PAS fold,...	0.03	OrthoFinder
CCL19031	BN171_2820001	Two-component sensor histidine kinase [Ensembl]. His...	0.03	OrthoFinder
CCL19098	BN171_2870028	Two-component sensor histidine kinase [Ensembl]. HAMP...	0.03	OrthoFinder
CCP46064	mtrB, Rv3245c	Two component sensory transduction histidine kinase MtrB...	0.02	OrthoFinder
CRN75341	cusS_1	Sensor kinase CusS [Ensembl]. HAMP domain, Histidine...	0.01	OrthoFinder
CRP07564	cusS_3	Sensor kinase CusS [Ensembl]. HAMP domain, Histidine...	0.02	OrthoFinder
CRP23335	rcsC_2	Sensor kinase protein RcsC [Ensembl]. Histidine kinase-,...	0.01	OrthoFinder
EDJ89943	CGSHi22421_01087	aerobic respiration control sensor protein ArcB...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEA	Interproscan
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	None	Extended
MF	GO:0004673	protein histidine kinase activity	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0007165	signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140299	small molecule sensor activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Enrichment
MF	GO:0003951	NAD+ kinase activity	IEP	Enrichment
MF	GO:0004751	ribose-5-phosphate isomerase activity	IEP	Enrichment
MF	GO:0004797	thymidine kinase activity	IEP	Enrichment
MF	GO:0005096	GTPase activator activity	IEP	Enrichment
MF	GO:0005525	GTP binding	IEP	Enrichment
BP	GO:0006612	protein targeting to membrane	IEP	Enrichment
BP	GO:0006613	cotranslational protein targeting to membrane	IEP	Enrichment
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	IEP	Enrichment
BP	GO:0006739	NADP metabolic process	IEP	Enrichment
BP	GO:0006741	NADP biosynthetic process	IEP	Enrichment
BP	GO:0009052	pentose-phosphate shunt, non-oxidative branch	IEP	Enrichment
MF	GO:0019001	guanyl nucleotide binding	IEP	Enrichment
MF	GO:0019136	deoxynucleoside kinase activity	IEP	Enrichment
MF	GO:0019205	nucleobase-containing compound kinase activity	IEP	Enrichment
MF	GO:0019206	nucleoside kinase activity	IEP	Enrichment
BP	GO:0019359	nicotinamide nucleotide biosynthetic process	IEP	Enrichment
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	Enrichment
BP	GO:0019363	pyridine nucleotide biosynthetic process	IEP	Enrichment
MF	GO:0030695	GTPase regulator activity	IEP	Enrichment
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Enrichment
BP	GO:0033365	protein localization to organelle	IEP	Enrichment
BP	GO:0034613	cellular protein localization	IEP	Enrichment
BP	GO:0045047	protein targeting to ER	IEP	Enrichment
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	Enrichment
BP	GO:0051668	localization within membrane	IEP	Enrichment
BP	GO:0070727	cellular macromolecule localization	IEP	Enrichment
BP	GO:0070972	protein localization to endoplasmic reticulum	IEP	Enrichment
BP	GO:0072594	establishment of protein localization to organelle	IEP	Enrichment
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	IEP	Enrichment
BP	GO:0072657	protein localization to membrane	IEP	Enrichment
BP	GO:0090150	establishment of protein localization to membrane	IEP	Enrichment
MF	GO:0140110	transcription regulator activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003661	HisK_dim/P	283	346
IPR040642	HKR_ArcB_TM	15	89
IPR008207	Sig_transdc_His_kin_Hpt_dom	686	757
IPR001789	Sig_transdc_resp-reg_receiver	528	639
IPR003594	HATPase_C	395	504
IPR013767	PAS_fold	156	266

External Links

No external refs found!

AAL22197 (STM3328, arcB)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation