AAL22364 (STM3502, ompR)

Aliases : STM3502, ompR

Description : response regulator in two-component regulatory system with EnvZ [Ensembl]. Response regulator receiver domain, Transcriptional regulatory protein [Interproscan].

Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AAL22364
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AAC76061 qseB, b3025 quorum sensing DNA-binding response regulator in... 0.06 OrthoFinder
AAC76894 cpxR, b3912 response regulator in two-component regulatory system... 0.07 OrthoFinder
AAK98880 spr0076, rr08 Response regulator [Ensembl]. Transcriptional regulatory... 0.04 OrthoFinder
AAK99332 spr0528, vncR VncR, response regulator [Ensembl]. Transcriptional... 0.03 OrthoFinder
AAL00800 spr1998, rr06 Response regulator [Ensembl]. Transcriptional regulatory... 0.02 OrthoFinder
AEA93716 OG1RF_11029 response regulator [Ensembl]. Response regulator... 0.03 OrthoFinder
AEA95222 OG1RF_12535 response regulator [Ensembl]. Response regulator... 0.02 OrthoFinder
AGT22192 N559_0379 osmolarity response regulator [Ensembl]. Response... 0.06 OrthoFinder
AGT26636 N559_5059, CpxR DNA-binding transcriptional regulator CpxR [Ensembl].... 0.03 OrthoFinder
AHY40427 CJ8421_06100 two-component regulator [Ensembl]. Transcriptional... 0.02 OrthoFinder
AKI49374 lisR, L2625_01474 two component response regulator [Ensembl].... 0.02 OrthoFinder
AKI50514 L2625_02705 DNA-binding response regulator [Ensembl]. Signal... 0.02 OrthoFinder
CCG26613 CiaR Two component system response regulator CiaR [Ensembl].... 0.04 OrthoFinder
CCG27642 No alias Two-component response regulator SA14-24 [Ensembl].... 0.03 OrthoFinder
CCL17650 BN171_1640040 Two-component response regulator [Ensembl]. Response... 0.02 OrthoFinder
CCL17829 vanR, BN171_1830003 Two-component response regulator [Ensembl]. Response... 0.04 OrthoFinder
CCL18024 BN171_2030010 Two-component response regulator [Ensembl]. Response... 0.03 OrthoFinder
CCL18961 BN171_2770012 Two-component response regulator [Ensembl]. Response... 0.04 OrthoFinder
CCP43651 prrA, Rv0903c Two component response transcriptional regulatory... 0.03 OrthoFinder
CCP43784 trcR, Rv1033c Two component transcriptional regulator TrcR [Ensembl].... 0.03 OrthoFinder
CPC31435 arlR, ERS093114_00002 Putative response regulator ArlR [Ensembl].... 0.04 OrthoFinder
CPC70217 vicR, ERS093114_01104 Two-component response regulator [Ensembl].... 0.05 OrthoFinder
CPD21777 hssR, ERS093114_02323 two-component response regulator [Ensembl].... 0.02 OrthoFinder
CRN77914 cusR Transcriptional regulatory protein CusR [Ensembl].... 0.02 OrthoFinder
CRO24960 ompR_1 Transcriptional regulatory protein OmpR [Ensembl].... 0.05 OrthoFinder
CRO38230 rstA Transcriptional regulatory protein RstA [Ensembl].... 0.03 OrthoFinder
CRO52494 czcR_1 Transcriptional activator protein CzcR [Ensembl].... 0.06 OrthoFinder
CRO55563 arcA_1 Dye resistance protein [Ensembl]. Response regulator... 0.03 OrthoFinder
CRP43486 qseB_3 Transcriptional regulatory protein QseB [Ensembl].... 0.04 OrthoFinder
CRP45027 ompR_4 Transcriptional regulatory protein OmpR [Ensembl].... 0.03 OrthoFinder
CRP58313 czcR_4 Transcriptional activator protein CzcR [Ensembl].... 0.05 OrthoFinder
EDJ90310 CGSHi22421_02241 transcriptional regulatory protein [Ensembl].... 0.04 OrthoFinder
KNA55120 VCV51_031823 response regulator receiver domain-containing protein... 0.03 OrthoFinder
KNA60550 VCV51_032221 response regulator receiver domain-containing protein... 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003941 L-serine ammonia-lyase activity IEP Enrichment
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006094 gluconeogenesis IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
MF GO:0016840 carbon-nitrogen lyase activity IEP Enrichment
MF GO:0016841 ammonia-lyase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
BP GO:0019319 hexose biosynthetic process IEP Enrichment
BP GO:0046364 monosaccharide biosynthetic process IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 7 117
IPR001867 OmpR/PhoB-type_DNA-bd 157 232
No external refs found!