1. Home
  2. Species
  3. Clostridioides difficile
  4. Sequence
  5. CCL19055

CCL19055 (BN171_2840003)


Aliases : BN171_2840003

Description : ABC-type transport system,pristinamycin/multidrug-family ATP-binding protein [Ensembl]. ABC transporter [Interproscan].


Gene families : OG_02_0000030 (OrthoFinder) Phylogenetic Tree(s): OG0000030_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL19055
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AAK99964 spr1161, ABC-NBD ABC transporter ATP-binding protein-unknown substrate... 0.03 OrthoFinder
AEA94367 OG1RF_11680 ABC superfamily ATP binding cassette transporter, ABC... 0.04 OrthoFinder
AKI50068 L2625_02223 ABC transporter, ATP-binding protein [Ensembl]. ABC... 0.04 OrthoFinder
CRN65300 No alias putative ABC transporter ATP-binding protein [Ensembl].... 0.03 OrthoFinder
EDJ91009 CGSHi22421_02766 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.03 OrthoFinder
KNA55290 VCV51_033103 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0005283 amino acid:sodium symporter activity IEP Enrichment
MF GO:0005342 organic acid transmembrane transporter activity IEP Enrichment
MF GO:0005343 organic acid:sodium symporter activity IEP Enrichment
MF GO:0005416 amino acid:cation symporter activity IEP Enrichment
CC GO:0005886 plasma membrane IEP Enrichment
BP GO:0006040 amino sugar metabolic process IEP Enrichment
BP GO:0006050 mannosamine metabolic process IEP Enrichment
BP GO:0006051 N-acetylmannosamine metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
BP GO:0006814 sodium ion transport IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
MF GO:0015175 neutral amino acid transmembrane transporter activity IEP Enrichment
MF GO:0015225 biotin transmembrane transporter activity IEP Enrichment
MF GO:0015655 alanine:sodium symporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
MF GO:0022858 alanine transmembrane transporter activity IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
MF GO:0090482 vitamin transmembrane transporter activity IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 126 160
IPR003439 ABC_transporter-like_ATP-bd 57 114
IPR003439 ABC_transporter-like_ATP-bd 338 464
UniProtKB U3WZ52