AAL22864 (STM4025, yihW)

Aliases : STM4025, yihW

Description : putative glycerol-3-phosphate regulon repressor [Ensembl]. DeoR C terminal sensor domain, DeoR-like helix-turn-helix domain [Interproscan].

Gene families : OG_02_0000026 (OrthoFinder) Phylogenetic Tree(s): OG0000026_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AAL22864
Cluster	HCCA: Cluster_48

Target	Alias	Description	ECC score	Gene Family Method
AAC74840	ydjF, b1770	putative DNA-binding transcriptional regulator...	0.05	OrthoFinder
AAC75749	srlR, b2707	sorbitol-inducible srl operon transcriptional repressor...	0.06	OrthoFinder
AAC75847	fucR, b2805	l-fucose operon activator [Ensembl]. DeoR C terminal...	0.1	OrthoFinder
AAC76165	agaR, b3131	transcriptional repressor of the aga regulon [Ensembl]....	0.03	OrthoFinder
AAC77148	ulaR, b4191	transcriptional repressor for the L-ascorbate...	0.03	OrthoFinder
AAK99871	spr1067, lacR	Lactose phosphotransferase system repressor [Ensembl]....	0.04	OrthoFinder
AAL00776	spr1974, fcsR	Regulator of fucose operon [Ensembl]. DeoR C terminal...	0.04	OrthoFinder
AAL21799	STM2919, ygbI	putative regulatory protein, deoR family [Ensembl]. DeoR...	0.03	OrthoFinder
AEA93589	OG1RF_10902	DeoR family transcriptional regulator [Ensembl]. DeoR C...	0.04	OrthoFinder
AGT22846	N559_1069, FucR	DNA-binding transcriptional activator FucR [Ensembl]....	0.06	OrthoFinder
AGT22961	N559_1195, SrlR	DNA-bindng transcriptional repressor SrlR [Ensembl]....	0.06	OrthoFinder
AGT26302	N559_4710, UlaR	transcriptional repressor UlaR [Ensembl]. DeoR C...	0.04	OrthoFinder
CCG27227	No alias	Lactose phosphotransferase system repressor [Ensembl]....	0.03	OrthoFinder
KNA52275	VCV51_033441	deoR family Bacterial regulatory protein [Ensembl]. DeoR...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001514	selenocysteine incorporation	IEP	Enrichment
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003677	DNA binding	IEP	Enrichment
MF	GO:0003746	translation elongation factor activity	IEP	Enrichment
MF	GO:0004518	nuclease activity	IEP	Enrichment
MF	GO:0005488	binding	IEP	Enrichment
BP	GO:0006066	alcohol metabolic process	IEP	Enrichment
BP	GO:0006417	regulation of translation	IEP	Enrichment
BP	GO:0006451	translational readthrough	IEP	Enrichment
MF	GO:0008080	N-acetyltransferase activity	IEP	Enrichment
MF	GO:0008134	transcription factor binding	IEP	Enrichment
BP	GO:0008643	carbohydrate transport	IEP	Enrichment
BP	GO:0009401	phosphoenolpyruvate-dependent sugar phosphotransferase system	IEP	Enrichment
BP	GO:0010608	posttranscriptional regulation of gene expression	IEP	Enrichment
MF	GO:0016407	acetyltransferase activity	IEP	Enrichment
MF	GO:0016410	N-acyltransferase activity	IEP	Enrichment
MF	GO:0016661	oxidoreductase activity, acting on other nitrogenous compounds as donors	IEP	Enrichment
MF	GO:0016662	oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor	IEP	Enrichment
BP	GO:0019637	organophosphate metabolic process	IEP	Enrichment
BP	GO:0019751	polyol metabolic process	IEP	Enrichment
BP	GO:0032268	regulation of cellular protein metabolic process	IEP	Enrichment
BP	GO:0034248	regulation of cellular amide metabolic process	IEP	Enrichment
MF	GO:0042279	nitrite reductase (cytochrome, ammonia-forming) activity	IEP	Enrichment
BP	GO:0043647	inositol phosphate metabolic process	IEP	Enrichment
BP	GO:0046164	alcohol catabolic process	IEP	Enrichment
BP	GO:0046174	polyol catabolic process	IEP	Enrichment
BP	GO:0046434	organophosphate catabolic process	IEP	Enrichment
BP	GO:0046838	phosphorylated carbohydrate dephosphorylation	IEP	Enrichment
BP	GO:0046855	inositol phosphate dephosphorylation	IEP	Enrichment
BP	GO:0051246	regulation of protein metabolic process	IEP	Enrichment
BP	GO:0071545	inositol phosphate catabolic process	IEP	Enrichment
MF	GO:0097367	carbohydrate derivative binding	IEP	Enrichment
MF	GO:0098809	nitrite reductase activity	IEP	Enrichment
BP	GO:1901616	organic hydroxy compound catabolic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001034	DeoR_HTH	11	66
IPR014036	DeoR_C	80	237

External Links

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AAL22864 (STM4025, yihW)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation