AAL22864 (STM4025, yihW)

Aliases : STM4025, yihW

Description : putative glycerol-3-phosphate regulon repressor [Ensembl]. DeoR C terminal sensor domain, DeoR-like helix-turn-helix domain [Interproscan].

Gene families : OG_02_0000026 (OrthoFinder) Phylogenetic Tree(s): OG0000026_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AAL22864
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AAC74840 ydjF, b1770 putative DNA-binding transcriptional regulator... 0.05 OrthoFinder
AAC75749 srlR, b2707 sorbitol-inducible srl operon transcriptional repressor... 0.06 OrthoFinder
AAC75847 fucR, b2805 l-fucose operon activator [Ensembl]. DeoR C terminal... 0.1 OrthoFinder
AAC76165 agaR, b3131 transcriptional repressor of the aga regulon [Ensembl].... 0.03 OrthoFinder
AAC77148 ulaR, b4191 transcriptional repressor for the L-ascorbate... 0.03 OrthoFinder
AAK99871 spr1067, lacR Lactose phosphotransferase system repressor [Ensembl].... 0.04 OrthoFinder
AAL00776 spr1974, fcsR Regulator of fucose operon [Ensembl]. DeoR C terminal... 0.04 OrthoFinder
AAL21799 STM2919, ygbI putative regulatory protein, deoR family [Ensembl]. DeoR... 0.03 OrthoFinder
AEA93589 OG1RF_10902 DeoR family transcriptional regulator [Ensembl]. DeoR C... 0.04 OrthoFinder
AGT22846 N559_1069, FucR DNA-binding transcriptional activator FucR [Ensembl].... 0.06 OrthoFinder
AGT22961 N559_1195, SrlR DNA-bindng transcriptional repressor SrlR [Ensembl].... 0.06 OrthoFinder
AGT26302 N559_4710, UlaR transcriptional repressor UlaR [Ensembl]. DeoR C... 0.04 OrthoFinder
CCG27227 No alias Lactose phosphotransferase system repressor [Ensembl].... 0.03 OrthoFinder
KNA52275 VCV51_033441 deoR family Bacterial regulatory protein [Ensembl]. DeoR... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0001514 selenocysteine incorporation IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006417 regulation of translation IEP Enrichment
BP GO:0006451 translational readthrough IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
BP GO:0010608 posttranscriptional regulation of gene expression IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Enrichment
MF GO:0016662 oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
BP GO:0032268 regulation of cellular protein metabolic process IEP Enrichment
BP GO:0034248 regulation of cellular amide metabolic process IEP Enrichment
MF GO:0042279 nitrite reductase (cytochrome, ammonia-forming) activity IEP Enrichment
BP GO:0043647 inositol phosphate metabolic process IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Enrichment
BP GO:0046855 inositol phosphate dephosphorylation IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0071545 inositol phosphate catabolic process IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0098809 nitrite reductase activity IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001034 DeoR_HTH 11 66
IPR014036 DeoR_C 80 237
No external refs found!