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CPC34391 (mutS_1, ERS093114_00129)


Aliases : mutS_1, ERS093114_00129

Description : DNA mismatch repair protein MutS [Ensembl]. MutS domain V, MutS domain III, MutS family domain IV [Interproscan].


Gene families : OG_02_0000582 (OrthoFinder) Phylogenetic Tree(s): OG0000582_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPC34391
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AEA95122 mutS3, OG1RF_12435 DNA mismatch repair protein MutS [Ensembl]. MutS domain... 0.03 OrthoFinder
AGT22910 N559_1140, MutS DNA mismatch repair protein MutS [Ensembl]. MutS domain... 0.03 OrthoFinder
AKI49400 mutS, L2625_01500 DNA mismatch repair protein [Ensembl]. DNA mismatch... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006298 mismatch repair IEA Interproscan
MF GO:0030983 mismatched DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
InterPro domains Description Start Stop
IPR000432 DNA_mismatch_repair_MutS_C 599 785
IPR007696 DNA_mismatch_repair_MutS_core 256 546
IPR007695 DNA_mismatch_repair_MutS-lik_N 5 115
IPR007860 DNA_mmatch_repair_MutS_con_dom 125 237
IPR007861 DNA_mismatch_repair_MutS_clamp 412 505
No external refs found!