CCL19173 (aroE, BN171_2910008)

Aliases : aroE, BN171_2910008

Description : Shikimate dehydrogenase 2 [Ensembl]. Shikimate 5'-dehydrogenase C-terminal domain, Shikimate dehydrogenase substrate binding domain [Interproscan].

Gene families : OG_02_0000118 (OrthoFinder) Phylogenetic Tree(s): OG0000118_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: CCL19173
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AGT25966 N559_4356 shikimate 5-dehydrogenase [Ensembl]. Shikimate... 0.06 OrthoFinder
AKI48439 aroE-1, L2625_00498 shikimate 5-dehydrogenase [Ensembl]. Shikimate... 0.06 OrthoFinder
AKI50234 L2625_02401 shikimate 5-dehydrogenase, putative [Ensembl]. Shikimate... 0.04 OrthoFinder
CRO80494 aroE_1 Quinate/shikimate dehydrogenase [Ensembl]. Shikimate... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
InterPro domains Description Start Stop
IPR013708 Shikimate_DH-bd_N 12 94
IPR041121 SDH_C 256 281
UniProtKB U3WYA2