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CPC39960 (potB, ERS093114_00324)


Aliases : potB, ERS093114_00324

Description : Spermidine Putrescine ABC transporter permease component potB [Ensembl]. Binding-protein-dependent transport system inner membrane component [Interproscan].


Gene families : OG_02_0000265 (OrthoFinder) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPC39960
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AAC73943 potH, b0856 putrescine ABC transporter permease [Ensembl].... 0.03 OrthoFinder
AAL00049 spr1245, potB ABC transporter membrane-spanning... 0.04 OrthoFinder
AAL19815 STM0879, potH putrescine transporter [Ensembl].... 0.03 OrthoFinder
AGT24824 N559_3164 spermidine/putrescine ABC transporter membrane protein... 0.07 OrthoFinder
AKI48758 potB, L2625_00829 spermidine/putrescine ABC transporter, permease protein... 0.05 OrthoFinder
CCG27580 PotB Spermidine Putrescine ABC transporter permease component... 0.04 OrthoFinder
CRO12288 potB_1 Spermidine/putrescine transport system permease protein... 0.02 OrthoFinder
CRO82794 potH_1 Putrescine transport system permease protein PotH... 0.03 OrthoFinder
CRO92437 potH_2 Putrescine transport system permease protein PotH... 0.03 OrthoFinder
CRO93070 potB_2 Spermidine/putrescine transport system permease protein... 0.04 OrthoFinder
KNA57823 VCV51_032792 binding-protein-dependent transport system inner... 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004797 thymidine kinase activity IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0019136 deoxynucleoside kinase activity IEP Enrichment
MF GO:0019205 nucleobase-containing compound kinase activity IEP Enrichment
MF GO:0019206 nucleoside kinase activity IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 77 259
No external refs found!