CPC51307 (cydC, ERS093114_00667)

Aliases : cydC, ERS093114_00667

Description : Transport ATP-binding protein CydC [Ensembl]. ABC transporter transmembrane region [Interproscan].

Gene families : OG_02_0000998 (OrthoFinder) Phylogenetic Tree(s): OG0000998_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: CPC51307
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AAC73972 cydC, b0886 glutathione/cysteine ABC transporter export... 0.02 OrthoFinder
AAL19891 STM0956, cydC cytochrome-related transporter [Ensembl]. ABC... 0.01 OrthoFinder
AEA94350 OG1RF_11663 ABC superfamily ATP binding cassette transporter,... 0.01 OrthoFinder
AGT25015 N559_3362 thiol reductant ABC exporter, CydC subunit [Ensembl].... 0.03 OrthoFinder
AKI49060 L2625_01144 ABC transporter, ATP-binding/permease protein [Ensembl].... 0.03 OrthoFinder
AKI50652 cydD, L2625_02866 ABC transporter, ATPase and permease components... 0.03 OrthoFinder
EDJ89934 CGSHi22421_05677 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.03 OrthoFinder
EDJ91962 CGSHi22421_09403 cysteine/glutathione ABC transporter... 0.03 OrthoFinder
KNA53903 VCV51_030831, CydC transport ATP-binding protein CydC [Ensembl]. ABC... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 13 280
IPR003439 ABC_transporter-like_ATP-bd 347 487
No external refs found!