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CPC76063 (papS, ERS093114_01224)


Aliases : papS, ERS093114_01224

Description : poly A polymerase family protein [Ensembl]. Poly A polymerase head domain, tRNA nucleotidyltransferase domain 2 putative, Probable RNA and SrmB- binding site of polymerase A [Interproscan].


Gene families : OG_02_0000970 (OrthoFinder) Phylogenetic Tree(s): OG0000970_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPC76063
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AAL00217 spr1413, cca tRNA nucleotidyltransferase [Ensembl]. Poly A polymerase... 0.05 OrthoFinder
AKI49900 cca, L2625_02051 tRNA nucleotidyltransferase (CCA-adding enzyme)... 0.04 OrthoFinder
AKP15791 pcnB, WX61_01756 Poly(A) polymerase I precursor [Ensembl]. Poly A... 0.03 OrthoFinder
CRO21514 pcnB Poly(A) polymerase I precursor [Ensembl]. Poly A... 0.02 OrthoFinder
KNA51849 VCV51_030382 poly(A) polymerase [Ensembl]. Poly A polymerase head... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0006396 RNA processing IEA Interproscan
MF GO:0016779 nucleotidyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0008887 glycerate kinase activity IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0031388 organic acid phosphorylation IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
InterPro domains Description Start Stop
IPR032828 PolyA_RNA-bd 171 228
IPR032810 CCA-adding_enz_C 247 394
IPR002646 PolA_pol_head_dom 23 143
No external refs found!