CPC86428 (phoP, ERS093114_01516)

Aliases : phoP, ERS093114_01516

Description : Alkaline phosphatase synthesis transcriptional regulatory protein [Ensembl]. Transcriptional regulatory protein, Response regulator receiver domain [Interproscan].

Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CPC86428
Cluster	HCCA: Cluster_21

Target	Alias	Description	ECC score	Gene Family Method
AAC76061	qseB, b3025	quorum sensing DNA-binding response regulator in...	0.03	OrthoFinder
AAC76894	cpxR, b3912	response regulator in two-component regulatory system...	0.03	OrthoFinder
AAK99382	spr0578, rr09	Response regulator [Ensembl]. Helix-turn-helix domain,...	0.03	OrthoFinder
AAL20028	STM1096, copR	Copper resistance transcriptional regulatory protein...	0.04	OrthoFinder
AAL22051	STM3177, ygiX	putative transcriptional regulator [Ensembl]. Response...	0.02	OrthoFinder
AGT22192	N559_0379	osmolarity response regulator [Ensembl]. Response...	0.03	OrthoFinder
AGT26400	N559_4812	putative response regulator [Ensembl]. Response...	0.03	OrthoFinder
AGT26636	N559_5059, CpxR	DNA-binding transcriptional regulator CpxR [Ensembl]....	0.03	OrthoFinder
AKI49504	L2625_01607	DNA-binding response regulator [Ensembl]. Signal...	0.04	OrthoFinder
CCG26613	CiaR	Two component system response regulator CiaR [Ensembl]....	0.03	OrthoFinder
CCL20655	BN171_830005	Two-component response regulator [Ensembl]. Response...	0.05	OrthoFinder
CCP43651	prrA, Rv0903c	Two component response transcriptional regulatory...	0.02	OrthoFinder
CPC70217	vicR, ERS093114_01104	Two-component response regulator [Ensembl]....	0.03	OrthoFinder
CRO52494	czcR_1	Transcriptional activator protein CzcR [Ensembl]....	0.03	OrthoFinder
CRP43486	qseB_3	Transcriptional regulatory protein QseB [Ensembl]....	0.02	OrthoFinder
CRP58313	czcR_4	Transcriptional activator protein CzcR [Ensembl]....	0.03	OrthoFinder
KNA54887	VCV51_031804	response regulator receiver domain-containing protein...	0.04	OrthoFinder
KNA55120	VCV51_031823	response regulator receiver domain-containing protein...	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Enrichment
MF	GO:0003919	FMN adenylyltransferase activity	IEP	Enrichment
MF	GO:0004371	glycerone kinase activity	IEP	Enrichment
BP	GO:0005975	carbohydrate metabolic process	IEP	Enrichment
BP	GO:0006040	amino sugar metabolic process	IEP	Enrichment
BP	GO:0006050	mannosamine metabolic process	IEP	Enrichment
BP	GO:0006051	N-acetylmannosamine metabolic process	IEP	Enrichment
BP	GO:0006066	alcohol metabolic process	IEP	Enrichment
BP	GO:0006071	glycerol metabolic process	IEP	Enrichment
BP	GO:0006099	tricarboxylic acid cycle	IEP	Enrichment
MF	GO:0008531	riboflavin kinase activity	IEP	Enrichment
MF	GO:0008924	malate dehydrogenase (quinone) activity	IEP	Enrichment
BP	GO:0009401	phosphoenolpyruvate-dependent sugar phosphotransferase system	IEP	Enrichment
MF	GO:0016301	kinase activity	IEP	Enrichment
MF	GO:0016615	malate dehydrogenase activity	IEP	Enrichment
MF	GO:0016740	transferase activity	IEP	Enrichment
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Enrichment
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Enrichment
MF	GO:0016791	phosphatase activity	IEP	Enrichment
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	IEP	Enrichment
MF	GO:0016901	oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor	IEP	Enrichment
MF	GO:0019203	carbohydrate phosphatase activity	IEP	Enrichment
BP	GO:0019400	alditol metabolic process	IEP	Enrichment
BP	GO:0019751	polyol metabolic process	IEP	Enrichment
MF	GO:0019825	oxygen binding	IEP	Enrichment
MF	GO:0042132	fructose 1,6-bisphosphate 1-phosphatase activity	IEP	Enrichment
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Enrichment
MF	GO:0047465	N-acylglucosamine-6-phosphate 2-epimerase activity	IEP	Enrichment
MF	GO:0050308	sugar-phosphatase activity	IEP	Enrichment
MF	GO:0070566	adenylyltransferase activity	IEP	Enrichment
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001789	Sig_transdc_resp-reg_receiver	5	114
IPR001867	OmpR/PhoB-type_DNA-bd	155	228

External Links

No external refs found!

CPC86428 (phoP, ERS093114_01516)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation