CCL19317 (BN171_3020029)


Aliases : BN171_3020029

Description : putative membrane protein [Ensembl]. Protein of unknown function (DUF1648), MerR HTH family regulatory protein [Interproscan].


Gene families : OG_02_0000020 (OrthoFinder) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL19317
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AEA94389 glnR, OG1RF_11702 regulatory protein GlnR [Ensembl]. MerR HTH family... 0.03 OrthoFinder
CCL17810 BN171_1810017 Putative transcriptional regulator [Ensembl]. GyrI-like... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006305 DNA alkylation IEP Enrichment
BP GO:0006306 DNA methylation IEP Enrichment
BP GO:0007267 cell-cell signaling IEP Enrichment
BP GO:0009372 quorum sensing IEP Enrichment
BP GO:0009405 obsolete pathogenesis IEP Enrichment
BP GO:0009595 detection of biotic stimulus IEP Enrichment
BP GO:0009607 response to biotic stimulus IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0023052 signaling IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0044728 DNA methylation or demethylation IEP Enrichment
BP GO:0044764 multi-organism cellular process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051606 detection of stimulus IEP Enrichment
BP GO:0051704 multi-organism process IEP Enrichment
BP GO:0060245 detection of cell density IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR012867 DUF1648 151 195
IPR000551 MerR-type_HTH_dom 1 67
UniProtKB U3WZ67