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  5. CPD07676

CPD07676 (yheS_2, ERS093114_02000)


Aliases : yheS_2, ERS093114_02000

Description : ABC transporter ATP-binding protein [Ensembl]. ABC transporter C-terminal domain [Interproscan].


Gene families : OG_02_0000030 (OrthoFinder) Phylogenetic Tree(s): OG0000030_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPD07676
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AAC73907 ybiT, b0820 ABC-F family putative regulatory ATPase [Ensembl]. ABC... 0.03 OrthoFinder
AAC74035 uup, b0949 replication regulatory ABC-F family DNA-binding ATPase... 0.03 OrthoFinder
AAC76377 yheS, b3352 ABC-F family protein predicted regulatory ATPase... 0.04 OrthoFinder
AAK99482 spr0678, ABC-NBD ABC transporter ATP-binding protein-unknown substrate... 0.04 OrthoFinder
AAK99825 spr1021, ABC-NBD ABC transporter ATP-binding protein-unknown substrate... 0.04 OrthoFinder
AAL22322 STM3459, yheS putative ATPase component of ABC transporter [Ensembl].... 0.05 OrthoFinder
AEA93888 msrA, OG1RF_11201 ABC superfamily ATP binding cassette transporter, ABC... 0.01 OrthoFinder
AEA94698 OG1RF_12011 ABC superfamily ATP binding cassette transporter, ABC... 0.04 OrthoFinder
AGT22228 N559_0416 putative ABC transporter ATP-binding protein [Ensembl].... 0.04 OrthoFinder
AKI49428 L2625_01529 ABC transporter, ATP-binding protein [Ensembl]. ABC... 0.03 OrthoFinder
AKI49870 uup, L2625_02017 ABC transporter, ATP-binding protein [Ensembl]. ABC... 0.06 OrthoFinder
AKI50697 L2625_02912 ABC transporter, ATP-binding protein [Ensembl]. ABC... 0.06 OrthoFinder
AKP16088 uup_1, WX61_02062 ABC transporter ATP-binding protein uup [Ensembl]. ABC... 0.04 OrthoFinder
AKP16164 yheS, WX61_02140 putative ABC transporter ATP-binding protein YheS... 0.05 OrthoFinder
AKP16180 uup_2, WX61_02156 ABC transporter ATP-binding protein uup [Ensembl]. ABC... 0.03 OrthoFinder
CCG26528 No alias ABC transporter ATP-binding protein [Ensembl]. ABC... 0.03 OrthoFinder
CCL17577 BN171_1590001 ABC-type transport system, ATP-binding protein... 0.04 OrthoFinder
CCL17702 BN171_170003 ABC-type transport system, ATP-binding protein... 0.05 OrthoFinder
KNA55290 VCV51_033103 ABC transporter ATP-binding protein [Ensembl]. ABC... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP Enrichment
BP GO:0002949 tRNA threonylcarbamoyladenosine modification IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004000 adenosine deaminase activity IEP Enrichment
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Enrichment
MF GO:0004150 dihydroneopterin aldolase activity IEP Enrichment
MF GO:0004325 ferrochelatase activity IEP Enrichment
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006382 adenosine to inosine editing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008251 tRNA-specific adenosine deaminase activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0016553 base conversion or substitution editing IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0070525 tRNA threonylcarbamoyladenosine metabolic process IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR032781 ABC_tran_Xtn 237 320
IPR003439 ABC_transporter-like_ATP-bd 20 195
IPR003439 ABC_transporter-like_ATP-bd 346 475
IPR032524 ABC_tran_C 571 639
No external refs found!