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  5. CPD19875

CPD19875 (ERS093114_02271)


Aliases : ERS093114_02271

Description : Cysteine ABC transporter%2C substrate-binding protein [Ensembl]. Bacterial extracellular solute-binding proteins [Interproscan].


Gene families : OG_02_0000028 (OrthoFinder) Phylogenetic Tree(s): OG0000028_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPD19875
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AAC73950 artI, b0863 arginine transporter subunit [Ensembl]. Bacterial... 0.06 OrthoFinder
AAC74987 tcyJ, b1920 cystine transporter subunit [Ensembl]. Bacterial... 0.02 OrthoFinder
AAC75370 argT, b2310 lysine/arginine/ornithine transporter subunit [Ensembl].... 0.03 OrthoFinder
AAL00055 spr1251, glnH ABC transporter substrate-binding... 0.04 OrthoFinder
AAL00157 spr1353, glnH ABC transporter substrate-binding protein-glutamine... 0.03 OrthoFinder
AAL19766 STM0830, glnH glutamine high-affinity transporter [Ensembl]. Bacterial... 0.04 OrthoFinder
AAL19825 STM0890, artI arginine transport system [Ensembl]. Bacterial... 0.05 OrthoFinder
AAL21255 STM2354, hisJ histidine transport protein [Ensembl]. Bacterial... 0.03 OrthoFinder
AAL21256 STM2355, argT lysine/arginine/ornithine transport protein [Ensembl].... 0.04 OrthoFinder
AGT23304 N559_1552 lysine-arginine-ornithine-binding periplasmic protein... 0.04 OrthoFinder
AGT23305 N559_1553 histidine ABC transporter periplasmic substrate-binding... 0.03 OrthoFinder
AGT23574 N559_1841 cystine transporter subunit [Ensembl]. Solute-binding... 0.03 OrthoFinder
AGT25040 N559_3387 arginine 3rd transport system periplasmic binding... 0.02 OrthoFinder
AKP15747 WX61_01712 putative amino-acid ABC transporter-binding protein... 0.03 OrthoFinder
CBI66165 yckK, HPB8_608 putative polar amino acid transport system... 0.02 OrthoFinder
CCG26409 No alias Amino acid ABC transporter, amino acid-binding protein... 0.03 OrthoFinder
CCG27099 FliY Cystine ABC transporter, periplasmic cystine-binding... 0.05 OrthoFinder
CCL16927 BN171_1000001 ABC-type transport system, aminoacid-family... 0.06 OrthoFinder
CCL18016 BN171_2030002 ABC-type transport system, aminoacid-family... 0.04 OrthoFinder
CCL18562 BN171_2440003 ABC-type transport system,cystine/aminoacid-family... 0.03 OrthoFinder
CCL18566 BN171_2440007 ABC-type transport system,cystine/aminoacid-family... 0.04 OrthoFinder
EDJ90649 CGSHi22421_04048 arginine transporter permease subunit ArtQ [Ensembl].... 0.02 OrthoFinder
EDJ91875 CGSHi22421_08968 CTP synthetase [Ensembl]. Bacterial extracellular... 0.02 OrthoFinder
KNA59873 VCV51_032284 bacterial extracellular solute-binding protein, family 3... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004312 fatty acid synthase activity IEP Enrichment
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Enrichment
MF GO:0005451 monovalent cation:proton antiporter activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006353 DNA-templated transcription, termination IEP Enrichment
BP GO:0006450 regulation of translational fidelity IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
MF GO:0015491 cation:cation antiporter activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
InterPro domains Description Start Stop
IPR001638 Solute-binding_3/MltF_N 35 253
No external refs found!