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  5. CPD21743

CPD21743 (hssS, ERS093114_02322)


Aliases : hssS, ERS093114_02322

Description : Sensor histidine kinase colocalized with HrtAB transporter [Ensembl]. HAMP domain, Histidine kinase-, His Kinase A (phospho-acceptor) domain [Interproscan].


Gene families : OG_02_0000000 (OrthoFinder) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPD21743
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AAC73671 cusS, b0570 copper-sensing histidine kinase in two-component... 0.01 OrthoFinder
AAC76062 qseC, b3026 quorum sensing sensory histidine kinase in two-component... 0.01 OrthoFinder
AAK99909 spr1106, hk02 Histidine kinase [Ensembl]. PAS fold, Histidine kinase-,... 0.03 OrthoFinder
AAL22898 STM4058, cpxA sensory kinase in two-component regulatory system with... 0.04 OrthoFinder
AEA93717 yclK, OG1RF_11030 sensor histidine kinase [Ensembl]. HAMP domain,... 0.03 OrthoFinder
AEA94849 vanS, OG1RF_12162 sensor histidine kinase VanS [Ensembl]. Histidine... 0.04 OrthoFinder
AGT25041 N559_3388 putative signal transduction histidine kinase [Ensembl].... 0.03 OrthoFinder
AKI50513 L2625_02704 two-component sensor histidine kinase [Ensembl]. Signal... 0.04 OrthoFinder
CCL16990 BN171_1060004 Two-component sensor histidine kinase [Ensembl]. His... 0.02 OrthoFinder
CCL17157 BN171_1330018 Two-component sensor histidine kinase [Ensembl]. His... 0.03 OrthoFinder
CCL17878 BN171_1920005 Two-component sensor histidine kinase [Ensembl]. His... 0.03 OrthoFinder
CCL18713 BN171_2590001 Two-component sensor histidine kinase (fragment)... 0.04 OrthoFinder
CCL18737 BN171_260006 Two-component sensor histidine kinase [Ensembl]. His... 0.02 OrthoFinder
CCL19031 BN171_2820001 Two-component sensor histidine kinase [Ensembl]. His... 0.03 OrthoFinder
CCL20054 BN171_3670037 Two-component sensor histidine kinase [Ensembl]. His... 0.03 OrthoFinder
CCL20619 BN171_750003 Two-component sensor histidine kinase [Ensembl]. His... 0.04 OrthoFinder
CRN98652 pfeS_2 Sensor protein PfeS [Ensembl]. HAMP domain, Histidine... 0.02 OrthoFinder
CRO19961 qseC_1 Sensor protein QseC [Ensembl]. Histidine kinase-, His... 0.02 OrthoFinder
CRO24987 envZ_1 Osmolarity sensor protein EnvZ [Ensembl]. HAMP domain,... 0.03 OrthoFinder
CRO52522 czcS_1 Sensor protein CzcS precursor [Ensembl]. HAMP domain,... 0.01 OrthoFinder
CRP23335 rcsC_2 Sensor kinase protein RcsC [Ensembl]. Histidine kinase-,... 0.01 OrthoFinder
CRP44997 envZ_3 Osmolarity sensor protein EnvZ [Ensembl]. HAMP domain,... 0.03 OrthoFinder
CRP58291 czcS_3 Sensor protein CzcS precursor [Ensembl]. HAMP domain,... 0.01 OrthoFinder
KNA61031 VCV51_032006 hsp90-like protein [Ensembl]. Histidine kinase-, His... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0004358 glutamate N-acetyltransferase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006810 transport IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
CC GO:0033573 high-affinity iron permease complex IEP Enrichment
BP GO:0034755 iron ion transmembrane transport IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
CC GO:1905862 ferroxidase complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR003594 HATPase_C 349 454
IPR003660 HAMP_dom 186 233
IPR003661 HisK_dim/P 239 303
No external refs found!