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  5. CPD35474

CPD35474 (rplY, ERS093114_02652)


Aliases : rplY, ERS093114_02652

Description : 50S ribosomal protein L25 [Ensembl]. Ribosomal L25p family, Ribosomal protein TL5 [Interproscan].


Gene families : OG_02_0000710 (OrthoFinder) Phylogenetic Tree(s): OG0000710_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CPD35474
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AAC75246 rplY, b2185 50S ribosomal subunit protein L25 [Ensembl]. Ribosomal... 0.1 OrthoFinder
AAL21127 STM2224, rplY 50S ribosomal subunit protein L25 [Ensembl]. Ribosomal... 0.1 OrthoFinder
AGT23381 N559_1635 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5... 0.03 OrthoFinder
AHY39565 CJ8421_01540 50S ribosomal protein L25/general stress protein Ctc... 0.06 OrthoFinder
AKP15816 rplY, WX61_01784 50S ribosomal protein L25 [Ensembl]. Ribosomal protein... 0.06 OrthoFinder
CBI65591 rplY, HPB8_34 large subunit ribosomal protein L25 [Ensembl]. Ribosomal... 0.04 OrthoFinder
CRO62512 rplY General stress protein CTC [Ensembl]. Ribosomal L25p... 0.05 OrthoFinder
EDJ90895 CGSHi22421_03563 50S ribosomal protein L25 [Ensembl]. Ribosomal L25p... 0.05 OrthoFinder
KNA58241 VCV51_031088 ribosomal L25p family protein [Ensembl]. Ribosomal L25p... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
MF GO:0008097 5S rRNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0004618 phosphoglycerate kinase activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006096 glycolytic process IEP Enrichment
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006757 ATP generation from ADP IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
BP GO:0009132 nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
MF GO:0015293 symporter activity IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046031 ADP metabolic process IEP Enrichment
BP GO:0046939 nucleotide phosphorylation IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
InterPro domains Description Start Stop
IPR020057 Ribosomal_L25_b-dom 101 181
IPR029751 Ribosomal_L25 8 91
No external refs found!