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  5. CCL19421

CCL19421 (BN171_3110014)


Aliases : BN171_3110014

Description : Two-component response regulator [Ensembl]. Response regulator receiver domain, Transcriptional regulatory protein [Interproscan].


Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL19421
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AAK99332 spr0528, vncR VncR, response regulator [Ensembl]. Transcriptional... 0.03 OrthoFinder
AAK99382 spr0578, rr09 Response regulator [Ensembl]. Helix-turn-helix domain,... 0.03 OrthoFinder
AAL00278 spr1474, rr01 Response regulator [Ensembl]. Transcriptional regulatory... 0.04 OrthoFinder
AAL00800 spr1998, rr06 Response regulator [Ensembl]. Transcriptional regulatory... 0.03 OrthoFinder
AEA93340 OG1RF_10653 response regulator [Ensembl]. Response regulator... 0.03 OrthoFinder
CCL19488 BN171_3180012 Two-component response regulator [Ensembl]. Response... 0.06 OrthoFinder
EDJ90310 CGSHi22421_02241 transcriptional regulatory protein [Ensembl].... 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000150 DNA strand exchange activity IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005886 plasma membrane IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0015225 biotin transmembrane transporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0042887 amide transmembrane transporter activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP Enrichment
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Enrichment
MF GO:0090482 vitamin transmembrane transporter activity IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 5 113
IPR001867 OmpR/PhoB-type_DNA-bd 152 226
UniProtKB U3WZD0