CCG26613 (CiaR)

Aliases : CiaR

Description : Two component system response regulator CiaR [Ensembl]. Response regulator receiver domain, Transcriptional regulatory protein [Interproscan].

Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CCG26613
Cluster	HCAA: Cluster_15

Target	Alias	Description	ECC score	Gene Family Method
AAC76061	qseB, b3025	quorum sensing DNA-binding response regulator in...	0.03	OrthoFinder
AAC76894	cpxR, b3912	response regulator in two-component regulatory system...	0.03	OrthoFinder
AAK99511	spr0707, ciaR	Response regulator, transcriptional regulatory protein...	0.05	OrthoFinder
AAL22051	STM3177, ygiX	putative transcriptional regulator [Ensembl]. Response...	0.02	OrthoFinder
AAL22364	STM3502, ompR	response regulator in two-component regulatory system...	0.04	OrthoFinder
AGT25698	N559_4072, PhoB	transcriptional regulator PhoB [Ensembl]. Response...	0.03	OrthoFinder
AGT26636	N559_5059, CpxR	DNA-binding transcriptional regulator CpxR [Ensembl]....	0.03	OrthoFinder
CCL18215	BN171_2170002	Two-component response regulator [Ensembl]. Response...	0.03	OrthoFinder
CCP43651	prrA, Rv0903c	Two component response transcriptional regulatory...	0.02	OrthoFinder
CPC70217	vicR, ERS093114_01104	Two-component response regulator [Ensembl]....	0.03	OrthoFinder
CPC86428	phoP, ERS093114_01516	Alkaline phosphatase synthesis transcriptional...	0.03	OrthoFinder
CRO52494	czcR_1	Transcriptional activator protein CzcR [Ensembl]....	0.03	OrthoFinder
CRP43486	qseB_3	Transcriptional regulatory protein QseB [Ensembl]....	0.02	OrthoFinder
CRP58313	czcR_4	Transcriptional activator protein CzcR [Ensembl]....	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Enrichment
MF	GO:0003919	FMN adenylyltransferase activity	IEP	Enrichment
BP	GO:0006766	vitamin metabolic process	IEP	Enrichment
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	Enrichment
BP	GO:0006771	riboflavin metabolic process	IEP	Enrichment
MF	GO:0008531	riboflavin kinase activity	IEP	Enrichment
BP	GO:0009110	vitamin biosynthetic process	IEP	Enrichment
BP	GO:0009231	riboflavin biosynthetic process	IEP	Enrichment
BP	GO:0018193	peptidyl-amino acid modification	IEP	Enrichment
BP	GO:0018208	peptidyl-proline modification	IEP	Enrichment
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	Enrichment
BP	GO:0042726	flavin-containing compound metabolic process	IEP	Enrichment
BP	GO:0042727	flavin-containing compound biosynthetic process	IEP	Enrichment
MF	GO:0070566	adenylyltransferase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001789	Sig_transdc_resp-reg_receiver	5	85
IPR001867	OmpR/PhoB-type_DNA-bd	119	193

External Links

No external refs found!

CCG26613 (CiaR)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation