Description : Transcriptional antiterminator of lichenan operon, BglG family [Ensembl]. HTH domain, PRD domain, PTS system, Mga helix-turn-helix domain, Phosphoenolpyruvate-dependent sugar phosphotransferase system [Interproscan].

Gene families : OG_02_0000208 (OrthoFinder) Phylogenetic Tree(s): OG0000208_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: CCG26679
Cluster HCAA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AAK99083 spr0279, bglG Transcription antiterminator BglG family [Ensembl]. HTH... 0.04 OrthoFinder
AEA93246 OG1RF_10559 BglG family transcriptional antiterminator [Ensembl].... 0.05 OrthoFinder
AEA95241 srlM, OG1RF_12554 putative transcriptional activator SrlM [Ensembl]. HTH... 0.05 OrthoFinder
AKI48268 L2625_00321 transcriptional antiterminator [Ensembl]. Mga... 0.07 OrthoFinder
AKI48362 L2625_00417 transcriptional antiterminator [Ensembl]. PTS EIIA... 0.03 OrthoFinder
AKI48384 L2625_00440 transcriptional antiterminator [Ensembl]. PRD domain,... 0.05 OrthoFinder
AKI48866 L2625_00944 transcriptional antiterminator, BglG family [Ensembl].... 0.04 OrthoFinder
AKI50136 L2625_02299 transcriptional antiterminator, putative [Ensembl].... 0.04 OrthoFinder
CPD26098 licR_4, ERS093114_02421 PTS system mannitol (Cryptic)-specific transporter... 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEA Interproscan
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0006814 sodium ion transport IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR007737 Mga_HTH 69 172
IPR013196 HTH_11 6 63
IPR003501 PTS_EIIB_2/3 408 489
IPR011608 PRD 208 284
IPR011608 PRD 309 396
IPR002178 PTS_EIIA_type-2_dom 525 657
No external refs found!