CCG26679

Description : Transcriptional antiterminator of lichenan operon, BglG family [Ensembl]. HTH domain, PRD domain, PTS system, Mga helix-turn-helix domain, Phosphoenolpyruvate-dependent sugar phosphotransferase system [Interproscan].

Gene families : OG_02_0000208 (OrthoFinder) Phylogenetic Tree(s): OG0000208_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CCG26679
Cluster	HCAA: Cluster_2

Target	Alias	Description	ECC score	Gene Family Method
AAK99083	spr0279, bglG	Transcription antiterminator BglG family [Ensembl]. HTH...	0.04	OrthoFinder
AEA93246	OG1RF_10559	BglG family transcriptional antiterminator [Ensembl]....	0.05	OrthoFinder
AEA95241	srlM, OG1RF_12554	putative transcriptional activator SrlM [Ensembl]. HTH...	0.05	OrthoFinder
AKI48268	L2625_00321	transcriptional antiterminator [Ensembl]. Mga...	0.07	OrthoFinder
AKI48362	L2625_00417	transcriptional antiterminator [Ensembl]. PTS EIIA...	0.03	OrthoFinder
AKI48384	L2625_00440	transcriptional antiterminator [Ensembl]. PRD domain,...	0.05	OrthoFinder
AKI48866	L2625_00944	transcriptional antiterminator, BglG family [Ensembl]....	0.04	OrthoFinder
AKI50136	L2625_02299	transcriptional antiterminator, putative [Ensembl]....	0.04	OrthoFinder
CPD26098	licR_4, ERS093114_02421	PTS system mannitol (Cryptic)-specific transporter...	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008643	carbohydrate transport	None	Extended
MF	GO:0008982	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity	IEA	Interproscan
BP	GO:0009401	phosphoenolpyruvate-dependent sugar phosphotransferase system	IEA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
MF	GO:0015144	carbohydrate transmembrane transporter activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006811	ion transport	IEP	Enrichment
BP	GO:0006812	cation transport	IEP	Enrichment
BP	GO:0006814	sodium ion transport	IEP	Enrichment
MF	GO:0015078	proton transmembrane transporter activity	IEP	Enrichment
MF	GO:0016491	oxidoreductase activity	IEP	Enrichment
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	Enrichment
BP	GO:0034220	ion transmembrane transport	IEP	Enrichment
BP	GO:0098655	cation transmembrane transport	IEP	Enrichment
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Enrichment
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Enrichment
BP	GO:1902600	proton transmembrane transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR007737	Mga_HTH	69	172
IPR013196	HTH_11	6	63
IPR003501	PTS_EIIB_2/3	408	489
IPR011608	PRD	208	284
IPR011608	PRD	309	396
IPR002178	PTS_EIIA_type-2_dom	525	657

External Links

No external refs found!

CCG26679

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation