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  5. CCG26940

CCG26940


Description : PTS system, mannose/fructose family IIB component [Ensembl]. PTS system sorbose subfamily IIB component [Interproscan].


Gene families : OG_02_0000075 (OrthoFinder) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCG26940
Cluster HCAA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AAC76172 agaB, b3138 N-acetylgalactosamine-specific enzyme IIB component of... 0.03 OrthoFinder
AAK98864 spr0060, PTS-EIIB Phosphotransferase system sugar-specific EIIB component... 0.13 OrthoFinder
AAK99097 spr0293, PTS-EII Phosphotransferase system sugar-specific EII component... 0.11 OrthoFinder
AAL00771 spr1969, PTS-EII Phosphotransferase system sugar-specific EII component... 0.04 OrthoFinder
AAL19527 STM0576 putative transport protein, PTS system [Ensembl]. PTS... 0.03 OrthoFinder
AAL23354 STM4536 putative PTS permease [Ensembl]. PTS system sorbose... 0.05 OrthoFinder
AEA94200 levE, OG1RF_11513 PTS family mannose/fructose/sorbose porter, IIB... 0.05 OrthoFinder
AEA94302 ulaB, OG1RF_11615 PTS family ascorbate porter, IIB component [Ensembl].... 0.05 OrthoFinder
AEA94948 OG1RF_12261 PTS family porter, enzyme I [Ensembl]. PTS system... 0.09 OrthoFinder
AEA95164 OG1RF_12477 PTS family ascorbate porter, IIB component [Ensembl].... 0.05 OrthoFinder
AKI47998 L2625_00022 PTS system, mannose/fructose/sorbose family, IIB... 0.04 OrthoFinder
CCL17251 BN171_1410013 PTS system, mannose/fructose/sorbose IIB component... 0.03 OrthoFinder
CCL19761 BN171_3460005 PTS system, mannose/fructose/sorbose IIB component... 0.04 OrthoFinder
CCL20257 BN171_390011 PTS system, mannose/fructose/sorbose IIB component... 0.05 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEA Interproscan
MF GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
MF GO:0005542 folic acid binding IEP Enrichment
BP GO:0006040 amino sugar metabolic process IEP Enrichment
BP GO:0006050 mannosamine metabolic process IEP Enrichment
BP GO:0006051 N-acetylmannosamine metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
BP GO:0015711 organic anion transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
MF GO:0072341 modified amino acid binding IEP Enrichment
InterPro domains Description Start Stop
IPR004720 PTS_IIB_sorbose-sp 2 154
No external refs found!