CCL19725 (prdR, BN171_3420013)


Aliases : prdR, BN171_3420013

Description : Transcriptional regulator, sigma-54-dependent [Ensembl]. PAS domain, Bacterial regulatory protein, CBS domain, Sigma-54 interaction domain [Interproscan].


Gene families : OG_02_0000008 (OrthoFinder) Phylogenetic Tree(s): OG0000008_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL19725
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AAC73433 prpR, b0330 propionate catabolism operon regulatory protein... 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0008134 transcription factor binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002078 Sigma_54_int 273 440
IPR000644 CBS_dom 10 60
IPR000644 CBS_dom 78 128
IPR002197 HTH_Fis 543 579
IPR000014 PAS 148 240
UniProtKB U3X3H0