- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : tRNA pseudouridine synthase B [Ensembl]. tRNA pseudouridylate synthase B C-terminal domain, TruB family pseudouridylate synthase (N terminal domain) [Interproscan].
Gene families : OG_02_0000639 (OrthoFinder) Phylogenetic Tree(s): OG0000639_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: CCG27061 | |
| Cluster | HCAA: Cluster_12 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| CRO21120 | truB | tRNA pseudouridine synthase B [Ensembl]. Pseudouridine... | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0003919 | FMN adenylyltransferase activity | IEP | Enrichment |
| MF | GO:0004329 | formate-tetrahydrofolate ligase activity | IEP | Enrichment |
| MF | GO:0004784 | superoxide dismutase activity | IEP | Enrichment |
| MF | GO:0005507 | copper ion binding | IEP | Enrichment |
| BP | GO:0006766 | vitamin metabolic process | IEP | Enrichment |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Enrichment |
| BP | GO:0006771 | riboflavin metabolic process | IEP | Enrichment |
| BP | GO:0006801 | superoxide metabolic process | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Enrichment |
| MF | GO:0008531 | riboflavin kinase activity | IEP | Enrichment |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | Enrichment |
| BP | GO:0009231 | riboflavin biosynthetic process | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| MF | GO:0010181 | FMN binding | IEP | Enrichment |
| BP | GO:0016311 | dephosphorylation | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016721 | oxidoreductase activity, acting on superoxide radicals as acceptor | IEP | Enrichment |
| BP | GO:0019725 | cellular homeostasis | IEP | Enrichment |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Enrichment |
| BP | GO:0042592 | homeostatic process | IEP | Enrichment |
| BP | GO:0042726 | flavin-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | Enrichment |
| MF | GO:0043169 | cation binding | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0045454 | cell redox homeostasis | IEP | Enrichment |
| MF | GO:0046872 | metal ion binding | IEP | Enrichment |
| MF | GO:0046914 | transition metal ion binding | IEP | Enrichment |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
| BP | GO:0065008 | regulation of biological quality | IEP | Enrichment |
| MF | GO:0070566 | adenylyltransferase activity | IEP | Enrichment |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Enrichment |
| No external refs found! |