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  5. CCG27317

CCG27317 (L13Ae)


Aliases : L13Ae

Description : LSU ribosomal protein L13p (L13Ae) [Ensembl]. Ribosomal protein L13 [Interproscan].


Gene families : OG_02_0000475 (OrthoFinder) Phylogenetic Tree(s): OG0000475_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCG27317
Cluster HCAA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC76263 rplM, b3231 50S ribosomal subunit protein L13 [Ensembl]. Ribosomal... 0.14 OrthoFinder
AAK99075 spr0271, rplM 50S Ribosomal protein L13 [Ensembl]. Ribosomal protein... 0.15 OrthoFinder
AAL22214 STM3345, rplM 50S ribosomal subunit protein L13 [Ensembl]. Ribosomal... 0.16 OrthoFinder
ADK87111 rplM, MPNE_0722 ribosomal protein L13 [Ensembl]. Ribosomal protein L13... 0.04 OrthoFinder
AEA95174 rplM, OG1RF_12487 50S ribosomal protein L13 [Ensembl]. Ribosomal protein... 0.06 OrthoFinder
AGT22335 N559_0533 ribosomal protein L13 [Ensembl]. 0.07 OrthoFinder
AHY40659 rplM, CJ8421_07410 50S ribosomal protein L13 [Ensembl]. Ribosomal protein... 0.08 OrthoFinder
AKI50532 rplM, L2625_02742 ribosomal protein L13 [Ensembl]. Ribosomal protein L13... 0.08 OrthoFinder
AKP14942 rplM, WX61_00876 50S ribosomal protein L13 [Ensembl]. Ribosomal protein... 0.02 OrthoFinder
CBI67038 rplM, HPB8_1481 large subunit ribosomal protein L13 [Ensembl]. Ribosomal... 0.06 OrthoFinder
CCL20597 rplM, BN171_70037 50S ribosomal protein L13 [Ensembl]. Ribosomal protein... 0.1 OrthoFinder
CPD14646 rplM, ERS093114_02155 50S ribosomal protein L13 [Ensembl]. Ribosomal protein... 0.2 OrthoFinder
CRP09073 rplM 50S ribosomal protein L13 [Ensembl]. Ribosomal protein... 0.16 OrthoFinder
EDJ91093 rplM, CGSHi22421_10142 50S ribosomal protein L13 [Ensembl]. Ribosomal protein... 0.05 OrthoFinder
KNA51829 VCV51_033517 ribosomal protein L13 [Ensembl]. Ribosomal protein L13... 0.1 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000921 septin ring assembly IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP Enrichment
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004817 cysteine-tRNA ligase activity IEP Enrichment
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005856 cytoskeleton IEP Enrichment
CC GO:0005940 septin ring IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0031106 septin ring organization IEP Enrichment
CC GO:0032156 septin cytoskeleton IEP Enrichment
BP GO:0032185 septin cytoskeleton organization IEP Enrichment
BP GO:0032784 regulation of DNA-templated transcription, elongation IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR005822 Ribosomal_L13 16 140
No external refs found!