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  5. CCG27384

CCG27384


Description : LSU ribosomal protein L22p (L17e) [Ensembl]. Ribosomal protein L22p/L17e [Interproscan].


Gene families : OG_02_0000485 (OrthoFinder) Phylogenetic Tree(s): OG0000485_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCG27384
Cluster HCAA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AAC76340 rplV, b3315 50S ribosomal subunit protein L22 [Ensembl]. Ribosomal... 0.19 OrthoFinder
AAK98998 spr0194, rplV 50S Ribosomal protein L22 [Ensembl]. Ribosomal protein... 0.21 OrthoFinder
AAL22298 STM3435, rplV 50S ribosomal subunit protein L22 [Ensembl]. Ribosomal... 0.22 OrthoFinder
ADK86723 rplV, MPNE_0199 ribosomal protein L22 [Ensembl]. Ribosomal protein... 0.14 OrthoFinder
AEA92843 rplV, OG1RF_10156 50S ribosomal protein L22 [Ensembl]. Ribosomal protein... 0.22 OrthoFinder
AHY40887 rplV, CJ8421_08575 50S ribosomal protein L22 [Ensembl]. Ribosomal protein... 0.24 OrthoFinder
AKI50562 rplV, L2625_02772 ribosomal protein L22 [Ensembl]. Ribosomal protein... 0.1 OrthoFinder
AKP15128 rplV, WX61_01074 50S ribosomal protein L22 [Ensembl]. Ribosomal protein... 0.03 OrthoFinder
CBI65722 rplV, HPB8_165 large subunit ribosomal protein L22 [Ensembl]. Ribosomal... 0.17 OrthoFinder
CCL20568 rplV, BN171_70008 50S ribosomal protein L22 [Ensembl]. Ribosomal protein... 0.24 OrthoFinder
CCP43450 rplV, Rv0706 50S ribosomal protein L22 RplV [Ensembl]. Ribosomal... 0.12 OrthoFinder
CPD13670 rplV, ERS093114_02127 50S ribosomal protein L22 [Ensembl]. Ribosomal protein... 0.19 OrthoFinder
CRO73906 rplV 50S ribosomal protein L22 [Ensembl]. Ribosomal protein... 0.15 OrthoFinder
EDJ91359 rplB, CGSHi22421_04628 50S ribosomal protein L2 [Ensembl]. Ribosomal protein... 0.2 OrthoFinder
KNA54977 VCV51_033160 ribosomal protein L22 [Ensembl]. Ribosomal protein... 0.15 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004813 alanine-tRNA ligase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001063 Ribosomal_L22 9 112
No external refs found!