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CCG27557


Description : PTS system, N-acetylgalactosamine-specific IIB component [Ensembl]. PTS system sorbose subfamily IIB component [Interproscan].


Gene families : OG_02_0000075 (OrthoFinder) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCG27557
Cluster HCAA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AAK98864 spr0060, PTS-EIIB Phosphotransferase system sugar-specific EIIB component... 0.06 OrthoFinder
AAK99097 spr0293, PTS-EII Phosphotransferase system sugar-specific EII component... 0.07 OrthoFinder
AAL19527 STM0576 putative transport protein, PTS system [Ensembl]. PTS... 0.04 OrthoFinder
AEA94200 levE, OG1RF_11513 PTS family mannose/fructose/sorbose porter, IIB... 0.04 OrthoFinder
AEA95087 sorB2, OG1RF_12400 PTS family mannose/fructose/sorbose porter, IIB... 0.03 OrthoFinder
AKI49997 L2625_02150 PTS system, mannose/fructose/sorbose family, IIB... 0.05 OrthoFinder
CCL17251 BN171_1410013 PTS system, mannose/fructose/sorbose IIB component... 0.06 OrthoFinder
CCL19761 BN171_3460005 PTS system, mannose/fructose/sorbose IIB component... 0.03 OrthoFinder
CCL20257 BN171_390011 PTS system, mannose/fructose/sorbose IIB component... 0.09 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEA Interproscan
MF GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006810 transport IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
InterPro domains Description Start Stop
IPR004720 PTS_IIB_sorbose-sp 6 149
No external refs found!