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  5. CCG27643

CCG27643


Description : Two-component sensor kinase SA14-24 [Ensembl]. PAS fold, Histidine kinase-, His Kinase A (phospho-acceptor) domain [Interproscan].


Gene families : OG_02_0000000 (OrthoFinder) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCG27643
Cluster HCAA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AAC76062 qseC, b3026 quorum sensing sensory histidine kinase in two-component... 0.02 OrthoFinder
AAC76893 cpxA, b3911 sensory histidine kinase in two-component regulatory... 0.04 OrthoFinder
AAK98881 spr0077, hk08 Histidine kinase [Ensembl]. HAMP domain, Histidine... 0.05 OrthoFinder
AAK99909 spr1106, hk02 Histidine kinase [Ensembl]. PAS fold, Histidine kinase-,... 0.08 OrthoFinder
AAL00696 spr1894, phoR Histidine kinase [Ensembl]. Histidine kinase-, His... 0.05 OrthoFinder
AAL20391 STM1471, rstB sensory histidine kinase in two-component regulatory... 0.02 OrthoFinder
AAL22197 STM3328, arcB sensory histidine kinase in two-component regulatory... 0.03 OrthoFinder
AAL22898 STM4058, cpxA sensory kinase in two-component regulatory system with... 0.03 OrthoFinder
AEA92947 OG1RF_10260 sensor histidine kinase [Ensembl]. Histidine kinase-,... 0.04 OrthoFinder
AEA93471 csrS, OG1RF_10784 sensor histidine kinase CsrS [Ensembl]. HAMP domain,... 0.03 OrthoFinder
AEA94102 OG1RF_11415 sensor histidine kinase [Ensembl]. PAS fold, Histidine... 0.05 OrthoFinder
AGT22193 N559_0380 osmolarity sensor protein [Ensembl]. HAMP domain, His... 0.03 OrthoFinder
AGT24483 N559_2810 ATPase/histidine kinase/DNA gyrase B/HSP90 domain... 0.04 OrthoFinder
AHY40430 CJ8421_06115 two-component sensor (histidine kinase) [Ensembl].... 0.03 OrthoFinder
AHY40465 CJ8421_06290 two-component sensor histidine kinase [Ensembl].... 0.03 OrthoFinder
AKI48259 L2625_00312 sensory box histidine kinase [Ensembl]. Histidine... 0.05 OrthoFinder
AKI49375 lisK, L2625_01475 two-component sensor histidine kinase [Ensembl]. ArlS,... 0.03 OrthoFinder
AKI49505 L2625_01608 sensor histidine kinase [Ensembl]. Signal transduction... 0.04 OrthoFinder
AKI49942 resE, L2625_02094 two-component sensor histidine kinase [Ensembl]. Signal... 0.04 OrthoFinder
AKI50429 phoR, L2625_02619 two-component sensor histidine kinase [Ensembl].... 0.03 OrthoFinder
CBI67092 HPB8_1535 two-component system, OmpR family, sensor kinase... 0.03 OrthoFinder
CCL17830 vanS, BN171_1830004 Two-component sensor histidine kinase [Ensembl]. His... 0.03 OrthoFinder
CCL18737 BN171_260006 Two-component sensor histidine kinase [Ensembl]. His... 0.04 OrthoFinder
CCL19031 BN171_2820001 Two-component sensor histidine kinase [Ensembl]. His... 0.04 OrthoFinder
CCL19098 BN171_2870028 Two-component sensor histidine kinase [Ensembl]. HAMP... 0.03 OrthoFinder
CCL19655 BN171_3350004 Two-component sensor histidine kinase [Ensembl]. HAMP... 0.04 OrthoFinder
CCL20067 BN171_3690011 Two-component sensor histidine kinase [Ensembl]. His... 0.04 OrthoFinder
CCL20656 BN171_830006 Two-component sensor histidine kinase [Ensembl]. His... 0.04 OrthoFinder
CRO52522 czcS_1 Sensor protein CzcS precursor [Ensembl]. HAMP domain,... 0.02 OrthoFinder
CRP58291 czcS_3 Sensor protein CzcS precursor [Ensembl]. HAMP domain,... 0.02 OrthoFinder
EDJ90311 CGSHi22421_02246 sensor protein QseC [Ensembl]. Histidine kinase-,... 0.03 OrthoFinder
KNA55257 VCV51_033070 hsp90-like protein [Ensembl]. HAMP domain, Histidine... 0.03 OrthoFinder
KNA55648 VCV51_030965 hsp90-like protein [Ensembl]. HAMP domain, Histidine... 0.03 OrthoFinder
KNA56837 VCV51_030476, PhoR phosphate regulon sensor kinase PhoR [Ensembl]. PAS... 0.03 OrthoFinder
KNA57841 VCV51_032810 hsp90-like protein [Ensembl]. Histidine kinase-,... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003911 DNA ligase (NAD+) activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004820 glycine-tRNA ligase activity IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006382 adenosine to inosine editing IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0008961 phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009143 nucleoside triphosphate catabolic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0016553 base conversion or substitution editing IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR003661 HisK_dim/P 209 273
IPR013767 PAS_fold 95 162
IPR003594 HATPase_C 326 436
No external refs found!