CCL19910 (BN171_360004)

Aliases : BN171_360004

Description : Transcriptional regulator, sigma-54-dependent [Ensembl]. Bacterial regulatory protein, Sigma-54 interaction domain [Interproscan].

Gene families : OG_02_0000008 (OrthoFinder) Phylogenetic Tree(s): OG0000008_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: CCL19910

Target Alias Description ECC score Gene Family Method Actions
AGT23137 N559_1375 putative 2-component transcriptional regulator... 0.03 OrthoFinder
CRP79731 ntrC_2 Nitrogen assimilation regulatory protein [Ensembl].... 0.03 OrthoFinder
KNA55086 VCV51_031847 nitrogen regulation protein NR(I) [Ensembl]. Sigma-54... 0.04 OrthoFinder
KNA58956 VCV51_031243 sigma-54 interaction domain-containing protein... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0008134 transcription factor binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR002078 Sigma_54_int 140 306
IPR002197 HTH_Fis 412 452
UniProtKB U3X406